Oratosquilla oratoria (Japanese mantis shrimp): 143041145
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Entry
143041145 CDS
T11268
Symbol
Atg18a
Name
(RefSeq) autophagy-related 18a isoform X1
KO
K17908
autophagy-related protein 18
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot04136
Autophagy - other
oot04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
143041145 (Atg18a)
04136 Autophagy - other
143041145 (Atg18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oot04131
]
143041145 (Atg18a)
03029 Mitochondrial biogenesis [BR:
oot03029
]
143041145 (Atg18a)
Membrane trafficking [BR:
oot04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
143041145 (Atg18a)
Mitochondrial biogenesis [BR:
oot03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
143041145 (Atg18a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
BCAS3_WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
DUF7165
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
VID27
CNH
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_NOL10_N
CFAP251_N
Beta-prop_VPS8
EIF3I
Beta-prop_Aladin
DUF7099
Motif
Other DBs
NCBI-GeneID:
143041145
NCBI-ProteinID:
XP_076069046
LinkDB
All DBs
Position
30:45615020..45672699
Genome browser
AA seq
474 aa
AA seq
DB search
MQSLASSVGVVTSGVGVVTSGVRAGIAGLMNLAAQGVDPSSGGGVFSVNFNQDFSSIGVG
TKVGYKLFSLNSLDKIEQICDNANEDTCIVERLFSSSLVAVVSLSSPRKLKVCHFKKNSE
ICNYSYPNTILAVKLNRARLVVCLEESLYIHNIRDMKVLHTIRDTPPNPTGLCALSISND
NCYLAYPGSNTMGQVQIFDALNLQAKTMIPAHDNPLAAIAFNASGTKIATASEKGTVIRV
FSVDDGSRLHELRRGMKRCATIFSLSFSPDSLFLLASSNTETVHVFKLEEVKEPQRVVVD
EQQGLMGWMSKAVTASASYLPTPVTDMLSQGRAFATVTLPFQGIRNVCAITVIQRQPRVV
VVATDGYLYLYNLNTVEGGDCPLHKQHRLEGTGGDGIVAAESSGAPVGPAYPGGAKKSEA
AAGCSGGGSYAGVVRGPTPPGMTESDKMSEMAAACESPPKNVLKFDDDNEFPPV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtttagcatccagcgttggcgtggtaacctccggagtgggtgtggtaacatca
ggcgtacgtgcgggtatagcaggactcatgaatctagctgcgcaaggtgtagacccctcc
tcaggtggaggggtattctccgtcaatttcaaccaagacttttcatctataggagttgga
acaaaagttggatataaacttttttcactcaattcacttgataagatagaacaaatatgc
gacaatgcaaacgaagacacgtgcattgtggaacgactcttctccagcagcctggtggct
gttgtcagcctctcatcaccacgcaaacttaaagtgtgccactttaagaagaactcagag
atttgcaactatagttatccaaatacaattttagcagttaaattaaatagagctcgttta
gtggtatgcctagaggagtcgttatacatccacaacattagagatatgaaggttcttcat
acaatacgagacacaccgcccaatcccactggcttgtgtgcattgtccataagtaatgac
aattgctacttggcctacccagggtccaatacaatgggacaagttcaaatctttgatgct
cttaatttgcaagccaaaacaatgattcctgcccatgataatccgttggcagccatagca
tttaatgcatcaggaacaaagattgcaacagcatcagaaaaaggtactgtcattcgagtc
ttcagtgtcgacgatggttctcgtttgcatgagctcaggcgagggatgaagagatgtgcc
acaattttctcgctttccttttcacctgactccctcttcctccttgcctcgtcaaacaca
gaaactgttcatgtcttcaaattggaagaagtcaaagaaccacaaagagtggtggttgac
gaacaacagggattgatggggtggatgagtaaagctgtgacagcctcggcaagctacttg
ccaactccagtcacggacatgctcagtcagggtcgagcatttgcaacagtgacccttcca
ttccaaggcatcagaaatgtttgtgcaatcactgtaatccagaggcagccacgtgtggtc
gtggtggcaacagatggatatctttatctatataacctgaacacggttgaaggtggggat
tgccctcttcacaaacaacacaggctggagggcacaggtggcgacggcatcgtggctgcc
gaatcctcaggtgcgcctgttggtcctgcatatccaggtggtgccaagaaatccgaagca
gcagctgggtgcagtggcggtggcagctatgcaggagtcgtcaggggacccacgccgccg
ggtatgacagagtcggacaagatgagcgaaatggccgctgcctgtgaatctcctccgaag
aatgttctcaagtttgacgatgataatgaatttccacctgtgtag
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