Ogataea parapolymorpha: HPODL_00018
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Entry
HPODL_00018 CDS
T08137
Name
(RefSeq) SWI/SNF chromatin-remodeling complex subunit SWI1
KO
K11771
SWI/SNF chromatin-remodeling complex subunit SWI1
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opa03021
]
HPODL_00018
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_00018
Transcription machinery [BR:
opa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
HPODL_00018
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Chromatin remodeling factors
SWI/SNF complex
HPODL_00018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
25769493
NCBI-ProteinID:
XP_013936928
UniProt:
W1QKA8
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Position
I:39496..42129
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AA seq
877 aa
AA seq
DB search
MNSEFWNEQAGDDEMAFLTFPENPPSSRPAPLQPTASQAQRPGEAFNPNDETMSGGTMSS
FSPQVFENNSGAQLEQQRVVPSQPPTQSPFEASVPAPTPPAQQYQQPRPVPSHSNSPNAN
TPQQRQMQIQMQQQHNFMCLLEEFMNRNNTPLAERYPVIGGKKMNLFLIYAVMVKFGGFN
NVLRSKKIVPVASKFGIPPDNNQLLREFVQMYHKCLLPFELYANTPEGMKELSMRKKQLE
QQMQSKQATPTSTSHQTPPVFNAPTPASVQETKFTPGEQRASEPSPATAESRHTTPQPNA
NFVPDFIRNYVPHQRLLDKVGGHDLKALSAFGEQIDHLKPVFLFVPELGKIDLNALSLSL
TSNIDAEVNLALNVLLIVTSDPNLVVPLGECMSLLEALASVGTDILDMLVSGNLTKRKGG
FEDVRPEYFKPNKIDEVFQKYSGRLKGDKDIEVLVDSFTSKEVDDESQDLEVEESDADVV
FEEPPRVDTPASDVDERPLAPFALPSYVELLEAARTEADDFSGRVYAKTFLDRRLMLVEE
LNTVSMILRNLSFVSNPQGVSNNNLMAANTSLLNFIYALITSLGTSEGFVFARKKMHLMK
DTLMTLTNISHAIELRSTKEAFLVLALCLAFGVPLDPEDEKAGFYVPKFDAGKGKYQLHA
IDVLTKVLCGSLNNKKMMSSVLARENLDPEMNSLMQTYDQGKNGDLVVRTMGFFVSALPL
HVIYEGIERFNDKLPSCLELLLGSIFVAEVIEDAQFSRNVALRLLGSPELVGTNLFKLAF
IFAAIYAKTNHENKLMYIHISGKSMELVNVLLRTAVGYAISAGARDELQTLFSVSKLFPA
DESILGALMTPSLPPDISVQAVESAKLLVRLQDALSN
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtgaattctggaacgagcaggccggcgacgacgaaatggcatttttgacgttt
ccagaaaacccgccgtcgtcgcgtcctgcgccactacagccgactgcgtcccaggcccaa
aggccgggcgaggcgttcaaccctaacgacgagacgatgtctgggggcaccatgtcttcc
ttttcaccgcaggtgtttgagaacaattcaggcgctcaattggagcagcagcgtgtggtt
ccatctcaaccaccgacgcagagcccgtttgaagcgtctgtgccggcaccaacgccgcct
gctcagcagtatcaacaaccccgtcccgtgccttcccacagtaacagtccgaacgccaac
actccgcagcagcgccagatgcagattcagatgcagcagcagcacaattttatgtgtctc
ctggaagagtttatgaatcgcaacaatactcccctggcggagaggtatcctgtgattggg
ggcaagaaaatgaacctgtttctaatttacgccgtgatggtgaagtttggcgggttcaac
aacgtgctcaggtccaagaagattgtgcctgtggccagcaagtttggaattccgcccgac
aacaaccagctgctgcgcgagtttgtccagatgtaccacaaatgtctgcttccgttcgag
ctgtatgccaacacgccggaggggatgaaggagctatcgatgcgaaaaaaacagcttgag
cagcagatgcagtccaagcaagccacgcccaccagtaccagtcaccaaacgccgcctgtt
ttcaatgctccgacgcccgcatcggtccaggagacaaaattcactccaggggaacagcgt
gcgagcgagccgtcgcctgctactgcagagtcgcgccacacaacgccgcagccgaacgcg
aactttgttcccgactttattcgcaattacgtgccgcaccaacgactgctcgacaaggtg
gggggtcacgatttgaaggcgttgtctgcctttggcgagcagattgaccatttgaagcct
gtgtttctgtttgtgccagaacttggcaagattgacctgaacgcgctctcgttgtcgctg
acgtccaatatcgacgcggaggtgaatcttgcgctgaacgttctgcttatcgttacgtcg
gacccaaacctcgtcgtgccgctcggcgagtgcatgagcctgcttgaggcgcttgccagc
gtcggcactgacatcctggacatgctagtctcaggcaatttgaccaaacgcaaaggtggg
ttcgaagacgtgcgcccggaatatttcaagccaaacaagatagacgaggttttccaaaag
tatagcggccgactgaagggagataaggacattgaggtgttggttgactcgttcacgtcg
aaggaggtggacgacgagagccaggatctggaggtcgaggagtccgacgcagatgttgtg
tttgaggagccgccgcgcgtcgacacgccggcgtcggacgtggacgagagaccgttggca
ccgtttgctctgccgtcgtacgtggagctgcttgaagctgcacgcacagaggcggacgac
ttttcgggccgcgtttatgccaaaacgttcctagaccggcgactgatgttggtcgaggag
ctcaacacagtgtcgatgattttgcgcaacttgtcgtttgtgagcaatcctcagggcgtc
tcaaacaataacctcatggcggctaacacgtcgctgctgaactttatctacgcactcata
acatcgctgggcacgtccgaagggtttgtgtttgcacggaaaaaaatgcatctgatgaaa
gacacactgatgaccttgaccaacatttcgcacgcaatcgagctgcgctcgacaaaggag
gctttcctggttcttgcgctgtgtctcgcgtttggcgttccactggacccggaggacgaa
aaagccgggttctacgtgcccaagttcgatgccggcaagggcaagtaccagctgcacgcg
atcgacgtgctcaccaaggtgctgtgcgggtcgctgaacaacaaaaagatgatgtcgtcc
gtgctagcgcgcgagaacctggacccggagatgaactcgctgatgcagacgtacgaccag
ggcaagaacggtgacctggtggtgcggacgatgggtttcttcgtttctgcgctgccgctg
cacgtgatttatgagggcatcgagcggttcaacgacaagctgccatcatgtctggagctg
ctgctgggcagtatctttgtggcggaggtgattgaggacgcgcagttctcgcgcaacgtg
gctctgcggctgctcggctcgcccgagctcgtggggactaacctgttcaagcttgcgttc
atctttgcggccatctacgccaagaccaaccacgagaacaaactgatgtacatccacatt
tcgggcaagagcatggagctggtgaatgtgctactgcgcacagcggtggggtatgccatc
tcggcgggggccagagacgagctgcagacactgttttcggtgtcgaagctgtttccggcg
gacgagtccattctcggcgcgctcatgacgccgtcgttaccgcctgatatctcagtgcag
gcggtggagtcggcaaagctactggtgcgattacaggatgctctaagtaactaa
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