KEGG   Ogataea parapolymorpha: HPODL_00021
Entry
HPODL_00021       CDS       T08137                                 
Name
(RefSeq) DNA repair like-protein Rad1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
opa  Ogataea parapolymorpha
Pathway
opa03420  Nucleotide excision repair
opa03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:opa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HPODL_00021
   03460 Fanconi anemia pathway
    HPODL_00021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:opa03032]
    HPODL_00021
   03400 DNA repair and recombination proteins [BR:opa03400]
    HPODL_00021
DNA replication proteins [BR:opa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    HPODL_00021
DNA repair and recombination proteins [BR:opa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     HPODL_00021
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 25769496
NCBI-ProteinID: XP_013936931
UniProt: W1QL49
LinkDB
Position
I:complement(46192..49185)
AA seq 997 aa
MSDPLFEAVSDDEQTESELNRLLQEDHETEELTVPVITRESEPEPPAPVRLVFSDRESKT
LNLTLSLGYQRQIVQELIEDDGLVILGRGLGLETIVANLLHVLGLSVIEDKKSLVLLVNA
SEAEIYKIGEELRELAWLDGKDEPVSFLSVSRDPTTLDKRRRLYEKGGILAITTRVLVTD
FLGDVLNPDLVTGIVFLHAERVKEYSSERFIANLYRKKNKWGFVKALSDEPESMGAGFQP
LYTRLKYLRLQKVMLWPRFHVDITNSLKSRKVENKVTEINVQMTDYMLKIQTGLLACMEA
CINELKRHNPEIASEYWTIENALDDEFVRNIRATLDPYWHRVSSTTKQVLYDFATLRELL
GRLFTWDSVQFYQELSSIVEANKPSVTNNNKTMAPWLLLDEAMTVISCSKARVFDKVRDD
NDAEATYLLEELPKWEQLAMILDDINEEKQHGDHSEDGPVLIMCTTAHCYSQLRNFLMSY
KEYRAGNRTGFSARKLMVRILKQHLAWKKGTGSRTVKIQKELNRVSNQARSDMDDDVAVS
RTFVRRKAVPNKRRRARGGAVMTSYNRMLSKTEDDDTVDDAVHEAMVDMLENEVGADLSD
DEIKEEDIGSVPPEEFEEFMDHLEQTPDFEEVRSHGITFEYVDRTDQIIIEKFDAKASNY
LLEEVMPSYIILYEPNLAFIRRVELFQSLRHTNPARCYFMYYGDSIEEQGYLNSIKREKD
AFTRLIREKSMLPKTFITDEDESARFLPTVAQSTRIAGGNPLDTKNKVVVDVREFRSQLP
FLCYLAAMEVIPCMLTVGDYVLSPKICIERKSIPDLVSSLKSGRLYQQCEQMFRYYELPA
LLIEFEEGKSFSLEPFTGYRDGRPLGTGPGSTAFQQDLQLKLMMLLIAFPSLKILWTSSP
FETARLFRELKLNQDEPDVDKAINAGLNPLFDKDTYFNDMAIDLIQNIPGISSVNVHLII
NKVRNIRELAQMSEAELAPLVGQEAAGKIVRFFERSI
NT seq 2994 nt   +upstreamnt  +downstreamnt
atgtccgatccgcttttcgaggccgtttccgacgatgagcagaccgaatccgagctcaac
aggctgctgcaggaggaccacgagacggaagagctcactgttccggtgataacccgtgaa
agcgagcctgagccgcctgcaccagtgcgtcttgtcttttcagaccgggagagcaagact
ctcaaccttacgctaagtcttggctaccagcgccagatcgtccaggagctgattgaggac
gatggattggttatactgggcagaggtttggggcttgaaaccatcgtggcaaacctgtta
catgttttagggttatctgtgatagaggacaagaagagcctagttttgctggtgaatgca
agcgaagccgaaatatacaaaatcggcgaagaactgcgcgagctggcgtggcttgacggc
aaggacgagccggtctcttttctgtctgtgagccgagatccgactaccctggacaaacga
cgccggttatacgaaaagggcggaatcctggccataaccacgcgagttttggtgacggat
tttctcggcgacgttttgaacccagacctcgtgaccggaattgtgtttttgcatgcagag
cgcgtcaaggagtactcaagcgaacggttcatcgccaacctgtaccgcaagaaaaataaa
tgggggtttgtcaaggcgctttcggacgagccagagagcatgggcgccgggttccagccg
ttgtacacgcggctgaagtatttgcgtctccaaaaagttatgttatggccgcggttccat
gtggacataaccaactcgctcaagtcgcgcaaggtggaaaacaaagtcactgagatcaat
gtccagatgacagactacatgcttaaaatccagaccggactgcttgcgtgcatggaagcc
tgcataaacgagctgaagcgacataacccggagatcgcgtccgaatactggactatcgag
aacgcgctggacgacgaattcgtgcgcaatatccgggccacgctcgacccatactggcac
agggtctcgtcaacgacaaaacaggtgctgtacgactttgccactctccgagagctgctc
ggccggctgtttacgtgggactctgtgcagttctaccaggagttatcgagcatcgtcgag
gcaaacaagccgtcggtgacaaacaataacaagaccatggccccgtggctgctgctggac
gaggccatgacggttatatcgtgcagtaaggcccgggttttcgataaagtgcgcgacgac
aacgacgcagaggccacttacttgctggaagagctgccaaaatgggagcagctggcgatg
attttggacgacatcaacgaagaaaaacagcacggtgaccactctgaggatgggccggtc
ctaattatgtgtacgacggcacactgctatagccagctacgcaattttctaatgagttat
aaagagtaccgggcgggcaaccgcaccgggttcagtgcacgcaagctcatggtgcggatt
ttgaagcagcatctggcgtggaagaaaggcacgggcagccgcaccgtgaagatccaaaag
gagctcaacagagtttcgaaccaggcacgtagcgacatggacgacgacgtggccgtgtcg
cggacgtttgtgcgtcgcaaggcggtgccgaacaaacggcgtcgcgcgcgtggcggtgca
gttatgacgtcgtataaccgtatgttgagcaagacggaagacgacgataccgtcgacgat
gcggtccacgaggcgatggtcgatatgctggaaaacgaggtgggtgccgatctcagcgac
gacgaaatcaaggaggaggacatagggtctgtgccgcccgaggagtttgaggagtttatg
gaccatttggagcagactccagatttcgaggaagtgcgctcgcacggcataacttttgag
tatgtcgaccggactgaccaaattatcatcgaaaaatttgacgccaaggccagtaattac
ctgctggaggaagtgatgccgtcgtacatcattctgtacgagccgaatttggcctttatc
cgacgagtcgagctcttccaatctttgcggcacacgaatcctgctcggtgctatttcatg
tactacggagattctatcgaggagcaggggtatctgaacagcattaaacgggaaaaggac
gctttcacgcgtcttatcagggaaaaatccatgctgccaaagacatttataaccgacgag
gacgagagcgctaggttcttgccgactgttgcgcagagcacgagaattgcagggggtaac
ccgcttgacacgaaaaataaggtcgttgttgatgtgcgggagttccgctcgcagctgccc
tttctttgctacttggccgcgatggaagttataccgtgcatgctgacggttggcgattac
gtattgtcacccaaaatctgcatcgagcggaagtcgataccggacctggtcagctcactg
aaaagtggccggttataccagcagtgcgagcagatgttccggtactacgagctgccggcg
ctgctgatcgagttcgaagagggcaagtcgttctcgttggagccattcacaggctaccgc
gacgggcggccgctgggcaccgggccgggcagcacagcgttccagcaggatctgcaacta
aagctgatgatgctgctgattgcgtttccaagcctgaaaatcttatggacctcgtcgccg
ttcgagaccgcgcggctgttccgggagctcaagctcaaccaggacgaaccggacgtcgac
aaggcgatcaacgccgggctgaacccactgttcgacaaggacacctacttcaacgacatg
gcgatcgatctgatccagaacattccaggcattagctctgtgaacgtgcacttgatcatc
aacaaggtgcgcaacatccgcgagctggcgcagatgagcgaggccgagctggctcctctt
gttgggcaggaggctgcgggcaagattgtgcggttttttgagcggagtatatga

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