Ogataea parapolymorpha: HPODL_00119
Help
Entry
HPODL_00119 CDS
T08137
Name
(RefSeq) Phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
opa
Ogataea parapolymorpha
Pathway
opa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPODL_00119
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
opa01007
]
HPODL_00119
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
opa03016
]
HPODL_00119
Enzymes [BR:
opa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
HPODL_00119
Amino acid related enzymes [BR:
opa01007
]
Aminoacyl-tRNA synthetase
Class II (U)
HPODL_00119
Transfer RNA biogenesis [BR:
opa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HPODL_00119
Prokaryotic type
HPODL_00119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Herpes_V23
YPEB_N
Motif
Other DBs
NCBI-GeneID:
25769594
NCBI-ProteinID:
XP_013937043
UniProt:
W1QKJ7
LinkDB
All DBs
Position
I:complement(241607..243376)
Genome browser
AA seq
589 aa
AA seq
DB search
MPTVAVDKADLFALLGKNYTTDEFDELCFQFGIELDEDTTDDVKGTDERPQLKIEVGANR
YDMLCIEGIAQALNEYLGRVAPPNYRLSAPTTSLTVKPSTQQIRPYACAAILRGIHFTQR
SYDSFIALQDKLHTNLCRHRTLVAMGTHDLDTLKPPFTYEALSPSEIKFVPLNQTVELDG
HQLMEFYEKDKNLGKYLHIIRDSPVYPVILDSNRTVCSLPPIINSDHSKVSLNTKNVFIE
ITATDRTKAEIVVNQLVAMFSRYCEQPFSVEPVEIISAHNHESRICPNFTQRTLKCEVPY
INSCLGLQLSPAEVCKLLSKMSVQAAPSQSDKDIIDVKIPITRPDILHQCDVMEDCAIAY
GYNNLKKTTPKTAATVAQPLPINKVADILRVASAQSGWLEVMPLTLCSHDENFKFLNNLD
DSRAVKLANPKTVEYQVVRTSLVPGILKTIKENKDHSLPIRVFECGDIVLKDDSERGASN
QRNWCAAYAGKASGFELIQGLLGKIMQTFRTPWLSAADAKTGKKGYWIEQDDSVKMYFAG
RGARIMYRAKAEAPAHNIGTIGVLHPEVLTRFELPFAVSLAEINAEVFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccgtcgccgtggacaaagccgatctgtttgccctgctgggcaaaaactacacc
acggacgagttcgacgagctgtgtttccagttcgggatcgagcttgacgaggacaccacc
gacgacgtcaagggaacagacgagagaccgcagctgaaaatagaggtcggtgcaaacaga
tacgacatgctgtgcatcgagggcattgcgcaggcgctgaacgagtatctgggccgtgtt
gcgcctcctaattatagactcagcgcgccaacgacgagtctgacggtgaagccgtcgacg
cagcagatcaggccgtatgcgtgcgcggccattttgcgcgggatccatttcacccagaga
tcctacgactcgttcattgcgttgcaggacaagctgcacaccaacctgtgcagacataga
acgctggttgcgatggggacccacgatctggacactctgaagcctccgttcacgtacgag
gccctgagtccttcggagatcaagtttgtgcctctgaaccagactgtcgagctagacggc
caccaattgatggagttttacgagaaggacaagaacctcggcaagtacctgcacattatt
agagattcgccggtgtatcccgtgatactggactcgaacagaaccgtgtgctcgttgcct
ccgatcatcaactcggaccactccaaggtgagtctcaacaccaaaaacgtctttatcgag
atcactgccaccgacaggaccaaggcagagattgtcgtcaaccagctggtcgccatgttc
tcgagatactgcgagcagccgttcagcgtcgagccggtcgagattatctcggcacacaac
cacgagtccagaatctgtccaaatttcacccagcgaacgctcaagtgcgaggttccctac
atcaactcgtgtctcggtttgcagctgagcccggcagaggtgtgcaagctactgtccaag
atgtctgtgcaggcggctccttcgcagtccgataaagacatcatcgacgttaagatccca
atcacgagaccagatatcctacaccagtgcgacgtcatggaggactgcgccattgcgtac
ggctacaacaacctcaagaagactactcccaagaccgctgctacagtggcccagccgctg
ccaatcaacaaggtggccgacattttgagagtggcctcggctcaaagcggctggctcgag
gtgatgccgctgactctgtgttcgcacgacgagaatttcaagttcctaaacaatctggac
gactccagggccgtcaagctggccaatccaaagacggttgagtaccaggtggtgagaacg
agccttgttccgggcattctcaagaccattaaggagaacaaggaccactctctgccaatc
agggtctttgagtgcggcgacatcgttctcaaggacgactctgaaagaggcgcctccaac
cagagaaactggtgtgcagcgtacgctggaaaggcgtctggcttcgagctgatccagggt
ctacttgggaaaatcatgcaaaccttcagaacgccgtggctctctgctgccgacgccaag
accggcaagaagggctactggatcgagcaggacgactccgtcaagatgtattttgctgga
agaggcgctagaattatgtacagagccaaggcggaagcgccggcacacaacatcggcacc
atcggcgtgctccatccggaggtgttgacccggttcgagctgcccttcgccgtgagtctg
gccgagatcaacgccgaggtgttcctataa
DBGET
integrated database retrieval system
