Ogataea parapolymorpha: HPODL_00167
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Entry
HPODL_00167 CDS
T08137
Name
(RefSeq) Component of the RSC chromatin remodeling complex
KO
K11763
chromatin structure-remodeling complex subunit RSC9
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opa03021
]
HPODL_00167
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_00167
Transcription machinery [BR:
opa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
HPODL_00167
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
HPODL_00167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WAPL
TPR_IPO5
ARM_KNTC1_1st
Motif
Other DBs
NCBI-GeneID:
25769642
NCBI-ProteinID:
XP_013935585
UniProt:
W1QGH7
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Position
III:<19693..>21357
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AA seq
554 aa
AA seq
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MYNIKSYTPPSHESRNGSEMPIVTPVRVMPLEPVASRDQEMRFLESNRQLKNDVYNYYNV
SGTNYKGPPEVERIQLAFESGIDEEIDYYLGHLVFISKDNPELLKFKSGFAFLIEPLSRF
FDCKAFDPQAENGDINRSLDAALIIRNTVQDIDNSQVISMNFKIKEVLMKIVNHRVILDN
CFTSESYEQLKELLRYSMDIIEAISSYLAPAPLDDPMFLSLTNLLQTVQDRSVIITALRS
LSRLMYNTRKEGDAADHLDDELVDRVVSYLAFAVNEDNDNDELLITALDFLYQFILPGRS
AKLLKNPTNCFVLQTFLPRLLTYKQKYKTEFTQEMPMLKLAKRSREDSPTNPPPLPENLI
TSLNNLPEPNRATAWMRCSYRATEEGDVTQISLWRSYEAQFQKYSSAGSNLRLLPAVDFI
KNVQHAFPNSNAMVLTLPDGTRKFIIKGIEPRAVPVDIDQGKVEALTDRAAASDHGGSSK
NNKQEPYHPVQYNFNDSLALTEINTSASLLITELMATKKGQELFVGHKEKLLDSVLKVPK
LLPYIHEALQKLDY
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtataatatcaagtcatacacaccgccttcacacgaatcgcgcaacggcagtgaaatg
ccaattgtgacgccagtgcgtgtcatgcctctggagccggtggcttccagagaccaggag
atgcgctttttagagagtaatagacagctcaaaaacgatgtatacaactactacaatgtg
tctggcaccaactacaagggtcctcctgaggtggaacgaatccaattggcatttgaatct
ggtattgacgaagagattgattactatcttggacaccttgtcttcatttccaaggataat
ccggaacttctaaagttcaaaagcggttttgcatttttaattgagcccctatcacggttt
tttgactgcaaagcctttgatccccaggccgaaaatggggacatcaatagatctcttgat
gccgctttgataatccgcaatactgtccaagacattgacaactcgcaggtcatttcaatg
aatttcaagattaaagaggttctcatgaagattgtgaaccatcgagttattttggataat
tgttttactagcgaatcatatgagcaacttaaagagcttctcaggtactcgatggatatc
atagaggctatatcttcatatttggcgcctgccccgctggacgatcccatgtttttgtcc
cttacaaatcttctacaaaccgtgcaggatcgatctgtgataatcaccgcactcagatca
ttgagtagactcatgtacaacactaggaaggaaggcgatgctgccgatcatctagacgac
gagcttgtggaccgcgtggtctcataccttgcttttgccgtgaatgaggataatgataac
gatgagttgctcattacggcattggatttcctatatcaatttattttgccaggacgctcg
gcaaagctgttgaagaatcctactaactgctttgtcttgcaaactttcctcccaagactg
ctgacttacaagcaaaagtacaaaactgaatttacgcaggaaatgcctatgttgaaactt
gcaaaaagatcaagagaggacagtccgacgaaccctcctcctttaccagaaaatctaata
acttccctgaacaaccttccggaacctaacagggccacagcttggatgagatgctcgtat
agggcgactgaggaaggagatgtgacacaaatttccctatggagatcatatgaagcacag
tttcaaaagtattcttcagcaggatcaaacttgcgtttgcttcctgccgttgattttatc
aaaaatgtacaacacgcgttcccaaattccaatgcaatggtattgactttacctgacgga
acacgaaaattcattatcaagggaattgaaccgagagctgtacctgtcgatattgaccaa
ggcaaggttgaggcactgacagatagagctgctgcatcggaccatggtggaagttccaag
aacaacaagcaagaaccataccatccagtacaatacaatttcaacgacagcctggccttg
acggaaataaatacctctgctagcttgttgattactgagctaatggcgacgaaaaaaggc
caggagctgtttgttggacacaaagaaaagttgctagacagtgtactgaaggttcctaag
cttctaccttacatccacgaggcgcttcaaaaactagattattaa
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