Ogataea parapolymorpha: HPODL_00243
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Entry
HPODL_00243 CDS
T08137
Name
(RefSeq) DNA polymerase gamma
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
opa
Ogataea parapolymorpha
Pathway
opa03410
Base excision repair
opa04139
Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPODL_00243
09140 Cellular Processes
09141 Transport and catabolism
04139 Mitophagy - yeast
HPODL_00243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
opa03032
]
HPODL_00243
03029 Mitochondrial biogenesis [BR:
opa03029
]
HPODL_00243
Enzymes [BR:
opa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPODL_00243
DNA replication proteins [BR:
opa03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
HPODL_00243
Mitochondrial biogenesis [BR:
opa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
HPODL_00243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
DNA_pol_A_exo1
DltD
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
25769718
NCBI-ProteinID:
XP_013935662
UniProt:
W1QFG7
LinkDB
All DBs
Position
III:144100..147240
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AA seq
1046 aa
AA seq
DB search
MDSLEPYQEIIKEVMSIGRAVQPMPKKWLFKSGWTRYAPGKKPEAVPYPSEKGLIYDVEV
LYKISKYPVIATAYSNRAWYGWVSPYLTGESDTLDGHLIPMNVQNEEKIIIGHNVSYDRA
RILEEYDITQSKAFYLDTMSLHVAVSGMCSRQKGKWMKYHKMKDEEKQKEGSLVKFREEV
ESESLKELIDNPNLDADETLSSFLEDDPWLRTSSLNGLQYVAHHHCGINITKETRDQFST
TNPQEIIENFQKLMEYCATDVVTTYRVFHKVYPEFRELVPHPVSLAALRHISQSFLPTNE
AWEKYITRTEQMYQDSVEKIENNLKKMCEQVVSLKDDPSQPWLNDPWLSQLDWTIIPPKL
TKKGTPYRRQKMPGYPEWYKKLFSKDNMTLTPKSRVTPLLLKLSWEGKPVYWLDSKGWCF
LVDKGEEEKYKKKNYTYLEPARIVEEGLASNPDFPELLQTKSFFKVPHEEGPESRTTTLM
SKPFLRYFEQGILSSEYDLAKDALNLAVRNSYWISSRERIMNQFVVYKKDAIDSKIGMII
PQIIPMGTITRRAVENTWLTASNAKKSRLGSELKAMIQSPPGYCFVGADVDSEELWVASL
VGDSVFKIHGGTAIGWMTLEGTKSEGTDLHSKTAKILGISRNDAKVFNYGRIYGAGVKFA
TSLLKKFNPALTEADARKTASELYAATKGQSQTVNKRKMWFGGSESIVFNRLETIAEQEH
PKTPVLGAGITSALQKKNLHSNTFLPSRINWAIQSSGVDYLHLLVVSMEYLLKRYKVDAR
LCITVHDEIRYIVKKEQKYKCAMILQIANLWTRAMFCHQLGIDEVPQSCAFFSAVDIDHV
LRKEVDLDCCTPSNPTAIPPGEALTIVDLLEKPEIQEFLTSIEEVDLSQYPVPKTVKPSD
LLDQDLKGPNKSLMIKLQIATSLDEFKKLRRLFTSNLRRNNTKFMEDYQRDFENFVISSA
TLGDMGDSITEKAINDIDLDFDVSWKERSSKSSRSKNTSATKTRRKRKESRKITDPGLSS
EMLDSDFNFHLENIASYKSKHHTIQA
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggacagtttggagccgtaccaagaaattatcaaagaagttatgagcataggacgtgct
gtgcaaccaatgccaaaaaagtggctatttaaaagtggatggacaagatacgcacccgga
aagaaacctgaagctgttccttatccctcagaaaaggggctaatctatgatgtcgaggtc
ttatacaaaattagtaaataccccgttattgcaaccgcatattccaaccgagcatggtat
ggatgggtctctccttatttgaccggcgaaagtgatacccttgatggccatttgatacca
atgaacgtccagaacgaggaaaaaatcattattggacataatgtttcgtacgacagagcg
cgcatactggaggaatacgatatcacgcaatctaaagctttttatttggatactatgtct
ttgcatgttgcagtaagtggaatgtgttctcgtcaaaaaggaaagtggatgaagtatcac
aagatgaaggacgaggaaaaacagaaagagggaagcttggtcaagttcagagaggaggtg
gaatcggaatctcttaaagagcttatagacaacccaaatttggatgccgacgaaaccctg
agctcatttctcgaagacgacccatggttgcgaaccagcagtttaaacgggttgcagtat
gttgctcatcatcactgtggcatcaacattactaaagaaacaagggatcaattctcgacc
actaatcctcaggaaatcattgaaaatttccaaaagctaatggaatattgtgccactgat
gtggtaaccacatacagagtcttccataaagtgtatccagaatttagagagctggtacct
catcctgttagcttagcagcattgaggcacatttcgcaatcattcctcccgactaacgaa
gcttgggagaagtacatcactcgaacagagcagatgtatcaggatagtgtggaaaagatt
gaaaacaacttaaagaagatgtgcgagcaggtcgtgtctttgaaagatgatccatcacag
ccatggctaaatgatccatggctgtcacaactagattggaccattattccacctaagttg
acgaaaaagggaactccttaccgaaggcagaagatgcctggctatcccgaatggtacaaa
aaattgttttccaaagataacatgactttaacccccaaatctagagtgacaccgttattg
ttgaaattgtcctgggagggaaaaccagtttactggcttgatagcaaagggtggtgcttt
ctagttgataaaggcgaggaggaaaagtacaagaagaagaactacacatatctagaacca
gccaggatagtggaggaggggttggcctcaaatccagacttcccggagctgttgcaaacg
aagtcttttttcaaagttcctcacgaggaaggacctgaatctcggacgacgacactaatg
tccaaaccgtttttgcgctattttgagcaaggcattttgtcatcggagtacgatcttgcc
aaagatgcactaaacttggccgttagaaacagttattggattagttcccgggaacggatc
atgaatcagtttgttgtttacaaaaaggatgcaattgactccaagatcggcatgatcatt
ccacaaattatcccaatgggaacaattactagacgtgctgttgaaaacacatggctcaca
gcttccaatgctaagaaatcgaggctcggatctgagctgaaggctatgattcaatcacct
ccaggctactgttttgtgggagcagatgttgacagtgaagaattgtgggtggcttctttg
gttggagactccgttttcaaaatacacggaggaactgcgattggatggatgactctggaa
ggtactaaaagtgaaggtacggatcttcactcgaaaacagcaaagattctaggaatctct
agaaacgacgcaaaggttttcaattacggtcgtatctacggtgcaggagtgaaatttgct
acttctctgctgaaaaagttcaacccagcacttacggaagcggacgccaggaagacagca
tctgaactctatgctgccaccaagggccaaagtcagacggtcaacaaaaggaaaatgtgg
tttggtggatcagaatccattgttttcaatagactggaaaccatagcagaacaagagcat
ccaaagactccggttctgggggctggtatcacttcggcattgcagaaaaagaatcttcat
tccaatacgtttcttccatcccgaatcaactgggcgatccaatcttcaggagttgattac
ttgcacctactagtggtatccatggagtaccttctgaaaagatacaaagtggacgcaagg
ctgtgcatcactgtgcacgacgagattcgctacatagtgaaaaaggagcagaagtacaaa
tgtgcaatgatccttcagatagcgaacttgtggacacgtgcgatgttctgtcatcagtta
ggtattgatgaggttcctcagagttgcgcctttttctcagccgtggacattgatcatgtt
ttgagaaaagaggtcgatttggattgctgtacgccttcaaacccaactgcaattccacca
ggagaagcgttgacgattgtggatcttttggagaagcccgaaatccaagagtttttaaca
tccattgaagaggtggacctgagccagtaccctgttcccaaaactgtgaaaccgagtgac
ctgcttgaccaggacctgaaaggtcccaacaaatctcttatgatcaaacttcagatagcc
acgagtcttgacgagtttaagaagctcagaaggctgttcactagcaatctgagacgcaac
aacacgaagtttatggaagattaccaacgagattttgaaaactttgtgatatcaagtgca
actctgggtgatatgggtgattccattacagagaaagctatcaatgatatagaccttgat
tttgatgtctcgtggaaagagagatcatcgaaatcatcaagatccaagaatactagcgcc
acgaagacaagaaggaagcgaaaggagtcacggaaaattactgatcctggactatcgagt
gaaatgcttgacagcgacttcaactttcatttggagaatattgcttcctataaatcgaag
caccacactattcaagcgtga
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