Ogataea parapolymorpha: HPODL_00374
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Entry
HPODL_00374 CDS
T08137
Name
(RefSeq) Protein NRD1
KO
K15560
protein NRD1
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opa03021
]
HPODL_00374
Transcription machinery [BR:
opa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
HPODL_00374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrd1-Seb1_dom2
CID
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
25769845
NCBI-ProteinID:
XP_013935794
UniProt:
W1QH84
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Position
III:complement(373175..374968)
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AA seq
597 aa
AA seq
DB search
MSVEEFETILKELPGLKAPGVSGSRIKKLKEIFLNNVSEESKLVSKLYSCCKATPATHKL
GALYVVDAIVRGLIDQISKSDTTEITESSPEGTANSAVYKIQSLIENLVDDAVPVSNDDI
KEKIGKLVEIWDKGDTFDKKIISSIKDKYFRTTTPPGTPPKKRVKFAVEPTVEPPAPSAS
SSSSKDPTSVLQALANLAKKTPSPASGSGSAKMVSPPPPPAAQPVSNGTAAAPAGSAPSS
SDPNAIFQLLQSMNKISGAQPNYQQQQQYGLPPQPPVSANQNRQNYRERDSNPLGRRPRS
RSPKRESKPVGDHERNIPGTPHYRERKPFIDPSIPQGYIKVYSRTIFIGGVPHSMDERTL
TQQLRPYAEVQSVILNSERKHAFVKVYSRQEAESVIQAFSVSHHPSGLRARWGVGFGPRD
CCDYQAGVSTIPISRLTDADKKWIVTAEWGGTGGMPLQSGLFIEEPDIEVGSGVSSKSIS
KKMPTNSTQNGPKSDGMPIVGASPPAGFQNSPPTGYPMMSNPGNIPINMGMPNGMPAGMP
NMGMPNMAGMPNMGQPGVDQNAMLAQMMTAMQQMQQQGGQQADMGAMFQNLANMMRR
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgaagaatttgaaacgatattaaaagagttaccgggactaaaagctccagga
gtgtctgggtcgagaatcaagaaactaaaagaaatattcctcaacaacgtgtccgaagag
tccaaacttgtgtctaagctgtattcgtgttgtaaagccacgcctgccacacacaagttg
ggagccctgtacgttgtcgacgcgattgtgagaggactgatcgaccagatctccaagtca
gatactacagaaattactgagtcttctccagaaggaacagccaactctgccgtgtacaag
atccagtcgttgatcgagaacctggtggatgacgctgtgcccgtttccaacgacgatatc
aaggagaagatcggtaaactcgtagaaatctgggacaagggagacacttttgacaagaaa
ataatttcatccatcaaagataagtatttccgtaccaccactcctccaggcactcctcct
aagaaaagggtcaagtttgctgtcgaaccaactgtcgagcctcctgctccctcagcctcc
tcgtcgtcgtctaaagacccgacctctgtgctgcaagctctggccaacctcgcaaagaag
actccttctcccgcttccggctctggctcggccaagatggtttctcccccacctccccct
gccgcgcagcctgtttccaacgggacggccgctgctccagccggctcggcgccttccagt
tccgatccaaatgccattttccagctgctgcagagcatgaacaagatttctggagcacag
cctaattaccagcaacagcagcagtacggccttcctccgcaaccgccagtctctgccaat
caaaacagacaaaactatagagaaagagactcgaacccgctcggaagaagaccgcggtcc
cgttcgccaaagagagaatccaagccggtcggcgaccatgagcgtaatattccgggaact
cctcattatcgcgagcgcaagccgttcatcgatccgtccattccacagggctacatcaag
gtttactcacggaccattttcattggcggtgtgccgcactccatggacgagaggacgctg
acgcagcagctgaggccgtatgcagaggtgcagagcgtgattttgaacagcgagagaaaa
cacgcctttgtcaaggtgtactcgagacaggaggccgagtcggtcatccaggcgttctcc
gtgagccaccatccgtccggactgcgtgccagatggggagtcggctttggaccaagagac
tgctgcgactatcaggcgggcgtgagcacgattccgatcagcaggctgaccgacgcagac
aagaaatggatagtgaccgccgagtggggaggaacggggggcatgccgctgcagtcgggg
ctgtttatcgaggagccggacattgaggtcgggtccggcgtgtcgtcaaagtcgatttcc
aagaaaatgcctacaaattctactcagaacggacccaagtccgacggtatgccgattgtc
ggggctagtccgccagctggtttccagaattcgcctcctacaggataccctatgatgtcg
aacccgggaaacatcccgatcaacatgggaatgcccaacggaatgcctgcgggaatgccc
aacatgggcatgccaaacatggctggaatgcctaacatggggcagccgggcgtggaccag
aacgccatgcttgcgcagatgatgaccgcgatgcagcagatgcagcagcagggcggccag
caggccgacatgggcgccatgttccagaacctggccaacatgatgagaagatag
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