Ogataea parapolymorpha: HPODL_00411
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Entry
HPODL_00411 CDS
T08137
Name
(RefSeq) Ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
opa
Ogataea parapolymorpha
Pathway
opa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HPODL_00411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opa03009
]
HPODL_00411
Enzymes [BR:
opa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
HPODL_00411
Ribosome biogenesis [BR:
opa03009
]
Eukaryotic type
90S particles
Other 90S particles
HPODL_00411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
25769882
NCBI-ProteinID:
XP_013935833
UniProt:
W1QJ52
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All DBs
Position
III:complement(426101..426871)
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AA seq
256 aa
AA seq
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MTEGNKNSEARKTETKTETTVPPASLVPVQPTPLSSKDKNTQRLVVVLSQACLETHKIST
GGGPGSDKYALLNCDDHQGLLRKMGRDISGARPDITHQCLLTLLDSPINKAGKLQVYIQT
AKGVLIEVNPSVRIPRTFKRFSGLMVQLLHKLSIRSVNSEEKLLKVIKNPITDHLPTKCR
KITLSYDAPVVRVQDYIKKLEPDESICIFVGAMARGKDNFADEFVDDKIGLSEYPLSASV
ACSKFCHGAEDAWGIF
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaggaaataagaactctgaggctagaaagactgagacgaagactgagacgact
gtccctccagcctctcttgtaccagttcaacctacaccactttcttcgaaagataagaat
acacagagactggtagtggtcttgtcgcaggcatgtctggaaacacacaagatcagcact
ggcggcggacctggaagcgataagtacgccctgctgaactgtgacgaccaccagggactg
cttcgcaaaatggggagagacatttctggtgccagaccggatatcactcaccagtgtctg
ctaacccttcttgattcgccaatcaacaaggctggtaagttgcaagtgtacattcagact
gccaagggtgttctcatagaagtgaacccttcggtgcgaattccaagaactttcaagcgg
ttttcagggcttatggtgcaacttttgcacaagctttccatcagatcggtcaattctgag
gaaaaattactcaaggtgatcaagaacccaatcacagaccatctgccaacaaagtgccgc
aagattacgctttcgtatgatgcgccagttgtgagggtgcaggactacattaagaaattg
gagccagacgaaagcatctgcattttcgtgggagccatggctcgcggaaaggataacttt
gcagacgagttcgtggacgacaagatcggactgtcggagtatccgctgtctgcatccgtc
gcatgcagcaagttctgtcacggtgcagaagatgcctggggcattttttga
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