KEGG   Ogataea parapolymorpha: HPODL_00501
Entry
HPODL_00501       CDS       T08137                                 
Name
(RefSeq) splicing factor U2AF subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
opa  Ogataea parapolymorpha
Pathway
opa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:opa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HPODL_00501
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:opa03041]
    HPODL_00501
Spliceosome [BR:opa03041]
 Complex A
  U2 snRNP components
   U2 related factors
    HPODL_00501
 Complex B
    HPODL_00501
SSDB
Motif
Pfam: zf-CCCH zf-CCCH_4 zf_CCCH_4 RRM_1 Torus SET_assoc zf-CCCH_3 zf-CCCH_2
Other DBs
NCBI-GeneID: 25769972
NCBI-ProteinID: XP_013935930
UniProt: W1QHH6
LinkDB
Position
III:596799..597398
AA seq 199 aa
MSGSVHNKQLCTFFQKVGACRHGDKCVRTHVYPKHSRTILFPKLYDNPKHVEGLKKGDPE
PVAPEIVSSLDETQIQQRIDSLYKDVFVELALKYGPVDKIVICENVNPHLSGNVYVRFRD
EADAMKCYKECNDRWYNGKPVFAELSPVTNLDDATCRLYYTNECDRGGMCNFIHERRADS
RLERDLFASQRRSMSERRR
NT seq 600 nt   +upstreamnt  +downstreamnt
atgtctgggtcggtccacaacaagcagttgtgcacttttttccaaaaagtcggggcctgc
cgacatggcgacaagtgtgtgaggacacacgtgtatccgaaacactcgagaaccattttg
tttcccaaactgtacgacaacccgaaacatgtggagggactgaaaaagggcgatcccgaa
cccgtcgcgccggagatcgtgtcctcgctcgacgaaacgcaaatccagcaacgcatcgac
tcgctttacaaggacgtttttgtcgaactggcgctgaagtacgggcctgtggataaaatt
gtcatctgtgagaacgtgaacccccacctcagtggaaacgtctatgtgcgcttcagggac
gaagccgacgcaatgaagtgctacaaggaatgcaacgatcgctggtacaacggcaagccc
gtatttgcagagctctcgccggtgaccaacctcgacgacgctacgtgccggctctactac
acaaacgagtgcgacagaggcggaatgtgcaacttcatacacgagagacgggcagactcc
cgcttggagcgcgatctgtttgcctctcagcgccgctccatgtccgaaagacgacgctag

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