Ogataea parapolymorpha: HPODL_00507
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Entry
HPODL_00507 CDS
T08137
Name
(RefSeq) hypothetical protein
KO
K22804
structural maintenance of chromosomes protein 6
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opa03400
]
HPODL_00507
DNA repair and recombination proteins [BR:
opa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
HPODL_00507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
25769978
NCBI-ProteinID:
XP_013935936
UniProt:
W1QG98
LinkDB
All DBs
Position
III:606693..610073
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AA seq
1126 aa
AA seq
DB search
MKRSAGDMSSADAEGENTSTATLPSSIETLESLSSAEAGDQIAVQDSQIDVNEQFTQNVT
RHLKRRRVGLMTQAHSSDVAAVDESPARAGIILRLELYNFMCHAAFKLDFGEQTNFIIGR
NGSGKSAILTGISVALGAKASDTDRGNSLKGLIMHGKNVARAIVTFKNEGPEAYRPHEYG
KIITIERVLKVDSSPSCQIKDETGKVRSTKKQTIDDILDYYGITIGNPMTILTQTEAKTF
LAHSTDEGKFRYFMEGTRLQETFNNVQELQKDVSEIKLKLAQDEEILHESKAKLDRALEL
WNNFKNSDEFKKQQDLLSGKRLWLEVVNKEEQLRLAKNLLEERQREMENSDKFVAESEDK
IRGYQAEKDDKAQTVLDLDEQLQKQEQEKDALKEMLKTTQERLKDVQSKQTAIQNEISVD
ESNLRAVEEKIEIEKSRLDSDTSSVLTNLQTLKTKQEKELGECRARSSELLTLVEEIKTQ
KADLNEAFRKEAGELKLELSRLDQSRAQFHNRQCSRLDGFGTGVVRLLKELQTSAQRYKG
RITGPLGMKFSLRSEFDKWGWVIEILLQRQLGTFVAENFSDSSLLRERMKFYQVQSDITV
RRAEVFDYSASVPRGNYLKMVDVLVFDDRTVECGLVDTSKIHSTLLIEDRETAEQVLLAD
RENRISAVICMIPGGALRISKRNNRLQTDPISAFKNRGWLSLHRTGDAENPTSQLDRQLK
ETSERLREAEARWRESEKKLDGEVGAAKSEIQELRQRAMVLTKSLAKIENKLEDLQRGTG
KLESHQEDHKNLSAQIQLNVERIKTRKAEIETLVQEYRQGRDKFTACGNEIKRIQRDKAE
LNAQIEELRDKIGEARDAVRSHQMKIGKFRADVNKLDDFVHVQLPPVIETLARRAESHCS
RDEAALTPEDTIEKVDSQIEAIANTLSKIERDVGVSRDQAKLNVIRAHDVYNDVKNKYQD
SVKLHNHLASSLQARLDNLTATASLLIQEVNSVFESALRLRGFTGKIDFDFAKARLVLKV
STKPSEKLRNVESFSGGEKSFAQIAFLLAIWKPMQSKVRGLDEFDVFMDQVNRRLALKLI
LQKVADNPKTQTIFITPLQISQVDGLDHPSVHIHEISPPERVTRAE
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgatctgctggggacatgtcgtcggcagacgccgaaggagaaaacacgagcacg
gcaacgctgccgagctcgatagaaacgctcgagtcgctaagttctgcagaagcgggtgac
cagatcgccgtgcaggattcgcagatcgacgtgaacgagcagttcacgcagaacgtgacg
cgacatctcaaacggcggcgtgtggggctcatgacccaggcacacagctcggacgttgcg
gcagttgacgagagccctgcgcgagccggaataatcctcaggctggagctgtataatttt
atgtgtcacgccgcgttcaagctggactttggcgagcagacaaactttatcatcggccgc
aacgggtcgggcaagtcggcgattctgacgggcatttctgtggccctgggggccaaggca
agcgatactgacaggggcaactcgctgaagggtctgatcatgcacggcaagaacgtggcg
cgagcgatcgtgacgttcaaaaacgagggccctgaggcgtacaggccgcacgagtacggc
aaaatcattacgatcgagcgtgtgctgaaggtagactcgagcccgtcgtgccagattaaa
gacgagacgggcaaggtgcgatcgactaagaagcagacgatcgacgatattctcgactac
tacggtatcaccatcggcaacccgatgaccatcctgacacagacagaggccaagacgttt
ttggcacactccacggacgaaggtaaattccgctacttcatggagggcacgagactccag
gagacgttcaacaacgtgcaagagctgcagaaagacgtgagcgagattaagctgaagctg
gcgcaggacgaggagattttgcacgagtccaaggccaagctggaccgagcgctggagctg
tggaacaacttcaagaactccgacgagttcaagaagcagcaggacctgctttctgggaag
cggctgtggctggaggttgtgaacaaggaggagcagctgcggcttgcgaaaaacctgctg
gaggagcggcagcgcgagatggagaactcggacaagtttgtggcggagtcggaggacaaa
atacgtggctaccaggcagagaaggacgacaaggcgcagacggtgttggatttagacgag
cagttgcagaagcaggagcaggaaaaggatgctttgaaggagatgctgaaaacaacgcag
gagcggctcaaggacgtgcagtccaagcagacagcgatccagaacgagatcagcgtcgac
gagagcaacttgcgtgctgtcgaggaaaagatcgagatcgagaagagccggctggattcg
gacacgagctctgtgctgactaatcttcagacgctcaagacgaagcaggagaaggaattg
ggcgagtgtcgagcgcggtcgagcgagctgctgaccctggtggaggagatcaaaacgcag
aaggcggatttgaatgaggcattccgcaaggaggccggtgagctcaagttggagctgagc
cggctggaccagagtcgcgcgcagttccacaaccggcagtgtagtcggctcgacggattc
ggcacgggtgtggtgcggcttctcaaggagctccagacaagcgcccagcggtacaagggc
cggatcacggggccattggggatgaaattttcgctgcggtccgaatttgacaagtggggg
tgggtgattgagattttgctacagagacagctggggacgtttgttgctgagaatttctcg
gattccagtcttttgcgcgagcgaatgaagttttatcaggtgcagagcgacattactgtg
cgtcgggcagaggtgtttgactactcggcgagcgttcctcgaggcaactatttgaaaatg
gtggatgtgcttgtttttgacgaccgcaccgtggagtgcggtctggttgacacgagcaag
atccacagcacgctgctgatcgaggaccgcgagacggcggagcaggtgctgttggcagac
cgcgagaatcgcatttctgcggtgatctgcatgatccccggcggtgctctgcggatatcc
aagaggaacaaccggttgcagacggacccgatcagcgcgttcaaaaaccgcggctggctg
agtttgcacaggactggagacgcagagaaccctacttcgcagctggaccggcagctgaag
gagacgagcgagcgactgcgcgaggcagaggcgcggtggcgcgagagcgagaagaagctg
gacggcgaggtgggcgcagcgaaaagtgagatccaggagctcaggcagcgcgcgatggtg
ctaaccaagtcgctggcaaagatcgagaacaagctggaggatttgcagcggggcacgggc
aagctggagtcgcaccaggaggatcacaagaacctgagcgcgcagatccagctgaacgtg
gagcggatcaagacacgaaaggccgaaatcgagacgttggtgcaggagtaccggcaggga
cgcgacaagtttacggcgtgcggcaacgaaatcaagcgcatccagcgcgacaaggccgag
ctaaacgcgcagatcgaggagctcagagacaagatcggcgaggcgcgcgacgcggtgcgc
agccaccagatgaagatcggcaagtttcgtgcagacgtgaacaagctggacgactttgtg
catgtgcagctaccgcctgtgatcgagactttggcacgccgtgctgagtcgcactgttcg
cgcgacgaggccgcattgacaccggaagacacgatcgagaaggtggactcgcaaatcgag
gcgatcgccaacacactgtcgaagatcgagcgtgacgttggggtgagcagagaccaggca
aagctgaacgtgattcgggcgcacgacgtatacaacgacgtgaaaaacaagtaccaggac
tcggtgaaactgcacaaccacctggcgtcgtcgttgcaggcgcggctcgacaatctcacc
gcaacggccagccttctgatccaggaggtgaacagcgtttttgagtctgccttgcggctg
cgcggctttacgggaaaaatcgacttcgactttgccaaggccaggctcgtgctcaaggtg
tcgacaaaaccgtccgagaagctgcggaatgtggagtcgttttcgggcggcgagaagtcg
tttgcgcagatcgcgtttttgctggcgatctggaagccgatgcagtcgaaagtgcgtggc
ctggacgagtttgacgttttcatggaccaggtcaaccgcagactcgcgctcaagctgatt
ctgcagaaagtcgccgacaaccccaaaacacagaccattttcatcacgccgctgcagatc
tcgcaggtcgacggcctcgaccacccctcggtccacatccacgaaatctctcctccagaa
agggttacccgggcagaatag
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