Ogataea parapolymorpha: HPODL_00557
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Entry
HPODL_00557 CDS
T08137
Name
(RefSeq) Pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opa03041
]
HPODL_00557
Spliceosome [BR:
opa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
HPODL_00557
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Suf
HAT_Syf1_CNRKL1_C
UTP6_C
NRDE-2
SapB_1
Motif
Other DBs
NCBI-GeneID:
25770028
NCBI-ProteinID:
XP_013935988
UniProt:
W1QJJ8
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All DBs
Position
III:complement(694492..696387)
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AA seq
631 aa
AA seq
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MDLSQDTDDLLANFPQWAALRHALAENDKDPQLWGELVSYVEGLVATQLNALKTNPQLSE
LLADDFRGLLARFPYLTEFWKRFVAIEYSIEGLDGSVAILEEAVASFPSSCELWVDYLNV
VISNNLKDESQVRNLFKRAVAHVGRQFLSHPIWDLYLDWESKHAGVTALEYVQILLEVVQ
YPLHQYARYFESLYEITSNFTIEDLIPAEKLHSLIESTYPSKTLEDLDADQVKEISDAYF
NDIFTSCYRRVTERWEFESQLTKQNFDLLPVSDEDMARWIKYLDFEESKGDFEQIKSLYE
RALVPTCSYETIWLKYMRYLIRNNQDTEYIVSLFNKACDIFVSADQPAIRYMYAKFYEQK
LEDYEKTRQIHISMIAAHPTETYPIARYVQYLCGRLGDEHTFRHLLRVLDVYTQKTTDEL
DADFGELRSVLNMWNAANLVVEAARIQWLRRKDVKAAREVLFAHFKSELVRCSVAFWTFF
FKFELAQKNTRNLANIVNHVKYYGQLPTTCINQLLDEFREHLFRTGTLDQLQPNRELVRL
ILETDIESSTHMKHFLKARVSANRDEDPVNKRLIKENGHPGVVSEYRPRLINPIDFDASI
LTQRDAAQMPRFTNVERATMPLKYLQMDEPN
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggacttgtctcaagatactgacgacctgcttgccaatttcccccaatgggcagccttg
agacacgctctggctgagaatgacaaggatccgcagttatggggcgagctggtgtcctat
gtcgagggtctggtagccacccagctgaacgcgcttaagaccaacccccagctatccgag
ctgctcgctgacgactttcgagggcttcttgcgcggtttccgtatctgacggagttttgg
aaacgttttgttgccattgaatattcgatcgagggacttgatggttcggtggccattctg
gaagaagcggtcgccagcttccctagttcctgcgagctatgggtcgactacctcaatgtt
gtgatatcgaacaaccttaaagatgaatcgcaggtgcgcaacctgtttaaacgggctgtc
gcgcacgtcggacgacagtttttgtcccatcctatctgggatctgtatctggactgggag
tccaaacatgccggagtcacggctctggaatacgttcagatcctcctagaggtggtgcag
tacccactgcatcagtacgcgcgctacttcgaatctctatatgagatcacgtcaaatttc
actatcgaggacttgattccagctgaaaaattgcactctctcatagaatcgacctatccg
agcaaaaccctagaagatcttgatgcggatcaagtgaaggaaatcagcgacgcctatttc
aatgatatattcacctcttgttacagacgcgtcacagaaagatgggaattcgaaagccag
ctcactaaacagaacttcgacctgctgcctgtttctgacgaggacatggcacgctggatc
aagtatctggattttgaggagtccaagggcgattttgagcagatcaaaagtctctatgag
cgggcactggtgcccacttgctcgtacgaaaccatctggcttaagtatatgcgctatctg
attcgcaataaccaggacaccgagtacatcgtgtcgctgttcaataaagcctgcgacatc
tttgtcagcgccgaccagcctgccataaggtacatgtatgccaagttctacgaacagaaa
ctagaagactacgaaaagacccgtcaaatacacatcagcatgatcgctgcgcatcctact
gagacttatccgattgcccgctatgtgcagtacctgtgtgggagactaggtgatgaacac
actttccgacacctgttgagggtgttggatgtgtatacgcaaaagacgacggacgagctg
gacgcagactttggcgagctgcggtcggtgttgaatatgtggaacgctgcgaatttggtg
gtggaggcggcgcgaatacagtggctgcgacgcaaagatgtcaaggcagcgcgcgaagtg
ctatttgcgcattttaaatcagagcttgttcggtgctctgttgcgttctggacgtttttc
ttcaagtttgagctcgcccagaaaaacaccagaaacctcgccaacatcgtcaatcatgtc
aaatattacggtcagctgcccacgacgtgcatcaaccagctgctcgatgagttccgcgag
catctattcagaactggcactttggaccagctgcaaccgaaccgcgaactcgtccggctc
attctggagaccgacatcgagtcctcgacgcacatgaaacatttcctaaaggcaagagtg
agcgcgaaccgcgacgaggacccggtcaacaagcggctgatcaaggaaaacggccacccg
ggcgtcgtttcagagtaccgtccacgcctgatcaaccctatcgatttcgacgcgtcgatt
ttgacgcagcgcgacgctgcacagatgccacggttcaccaacgttgagcgtgctaccatg
ccgcttaagtatctacaaatggatgaaccgaactaa
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