KEGG   Ogataea parapolymorpha: HPODL_00590
Entry
HPODL_00590       CDS       T08137                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
opa  Ogataea parapolymorpha
Pathway
opa03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:opa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    HPODL_00590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:opa03009]
    HPODL_00590
Ribosome biogenesis [BR:opa03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    HPODL_00590
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WD40 WDR55 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_TEP1_C NBCH_WD40 PEP5_VPS11_N WDR54 Beta-prop_Vps41 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_HPS5 Utp12 Rrn6_beta-prop TNP-like_RNaseH_C
Other DBs
NCBI-GeneID: 25770061
NCBI-ProteinID: XP_013936025
UniProt: W1QHS0
LinkDB
Position
III:755255..757969
AA seq 904 aa
MTVADSMKRRRVEASGSSVAVRSSKIFAPFRVIGHVSNGTPFAVGTLGQSFYIATVVGRS
FQIYDAATLHLLFVSSTQTETPIRSITAHFHYIFCSYGNKIGIFRRGKLEKELILPTADT
IRKVIIFGNYLVACTGSSLSVFEKKDEKFPTEYYGELKVNALNGEIVDIVHPPTYINKVV
VATTSHLLIFNVRTAKMVFVSEEFVDGITCIETAPALDILAVGNGVGSFAVYNLKKGKIL
RTVSTGSKSKITSLSFRTDGSPHVVCSMVNGDLFFYDLEKKTRVHVLRNAHKEVSGGVSK
VQFLSGQPILVTTGADNSLKEYVFDPALSDNSAVVSPPRHLRSRGGHSAPPTCITFGDSK
SHFIQSASQDRSFWTFSLRKDAQSQEMSQRQSAMKDGKRQAGISSTFKDKFPPITMIAQE
NAREGDWANIVTAHQDETFARTWDSRNKKVSKHVLDTIDGGIVKAVNITQCGNFALVGSS
NGGIGVYNLQSGKLRKNYKLHKKAVTGIAVDGMNRKMVSCALDGLVGFYDFSQSKFLGKL
QLDAPITQMVYHRGSDLVAFALDDLSIVVVDSATHKVVRQLFGHSNRITAMDFSPDGRWI
VSASLDSTIRTWDLPTGGCIDGIMVPNTVTCLKMSPLGDFLATTHVNGVGISLWTNKAQF
KPISTKHVEEEEFATMMLPNVSGEDGSSILEGAFAEDEEYSSGTYVSVDQLDKDLVTLSL
HSRTKFNTIMHLDTIKRRNKPSEPPKKPDSVPFFLQQTSEQKPAEVESQLMKLDPSAASF
ESDFTRLLREGAESSYDKFIDYLVDMSPATLDLELRTLQTTEPFTELKRFVDAINYGLKQ
NKNYEILVAVVSVFLKIHGDVLYNVQGEVVQALDEWRSVASQIDSKMDDMVKYCSAVINF
ITTT
NT seq 2715 nt   +upstreamnt  +downstreamnt
atgactgttgcagattcgatgaaacgacggagagttgaggcttctggatcttctgttgct
gtgcgcagctccaagatttttgcacctttcagagtcattggtcacgtctccaacggaact
ccttttgctgtgggaacattaggccagtctttttacatcgccactgtcgttggcagatcc
ttccaaatctacgacgcagcaaccctgcatctgctgtttgtgtcatccacccagacagaa
acccctattcgttccattacagcacatttccactatatcttttgttcgtatggaaataaa
atcggtattttcagacgaggcaaattggaaaaagagctcattctgccaactgctgatacc
atcagaaaagtgataatctttggcaattatttggttgcctgtacggggtcctcgctttct
gtgtttgagaagaaagatgaaaaattccctaccgaatactatggagagcttaaagtgaat
gctctcaatggcgagatcgtggatattgtgcatcctccaacttatatcaacaaagtagtt
gttgccacaacctctcatctgctcatattcaacgttagaactgcgaaaatggtgttcgtg
tccgaagagtttgttgatggaatcacttgtatcgaaacggccccagcactagacatcctg
gctgttggaaatggtgttggctcatttgctgtctacaacttgaaaaagggtaaaatcctt
agaaccgtgtccacaggatccaagtcgaaaataacatcgctgtcgttcagaactgatgga
tccccccacgtggtatgctcgatggtaaacggagacttgttcttctacgatttggagaaa
aagacgagagtccatgttttacgtaatgctcacaaagaggtttccggtggtgtttcaaag
gtgcaatttctaagcggacagccaatactggtcactactggcgccgacaacagtctgaag
gaatacgtttttgatcccgctctttcagacaactcggctgttgtctctcccccgagacac
ctgagatctcgtggaggacactcggctccacctacctgcatcacatttggtgactcgaag
tcgcattttatccaatctgcctcccaagatcgctcgttctggaccttctcgctacgtaaa
gatgcccagtcgcaggaaatgtctcaaaggcaatccgccatgaaggatggaaagcgccag
gcaggtatctcttcaacgttcaaggacaaattcccgccaatcaccatgatagctcaggag
aacgcaagagaaggagattgggccaatattgtcactgcacaccaagatgaaacgtttgca
cgtacatgggactcaagaaacaaaaaggttagtaaacacgttctggacacaatcgatggt
ggcattgtcaaggccgtgaacattactcagtgcggaaactttgcccttgttgggtctagc
aatggtggcattggagtgtataacttgcaaagtggaaaacttcgcaaaaactacaagttg
cacaaaaaggctgtcaccggtattgccgttgacggaatgaataggaagatggtttcgtgt
gctctcgacggactcgttggcttttacgatttcagtcaatcaaagtttttaggaaaattg
caactggacgctccaattacccaaatggtttaccacagaggttctgaccttgttgccttt
gctttggatgatctttccatcgttgtcgtcgactcggccacgcataaagtggtcaggcag
ctatttgggcactccaacagaatcactgctatggacttctcgcctgatggtcgctggatt
gtgtcggcatccttggactctactattaggacctgggatctgcctacaggtggctgcatt
gacggtataatggttcctaacactgtcacatgcttgaagatgtctcccttgggcgatttc
cttgcaaccacgcatgtcaatggagtaggtatatctttgtggaccaacaaagcgcaattc
aagccaatatccacgaagcacgtcgaagaggaggagttcgcaaccatgatgcttccaaat
gtgagcggcgaggacggctctagtattctggaaggtgcgtttgccgaggacgaggaatat
agctccggaacgtacgtttccgtggaccagcttgacaaagacctagtgactctttcgctg
cactcgcgcacaaagttcaatactattatgcatttggacacgatcaagaggaggaacaag
ccgtcggagcctccaaaaaaaccagactctgttccatttttcttgcaacagacaagcgag
caaaagccagcggaggtggagtcccagttgatgaagctagacccttctgctgcttcgttt
gagtctgattttacgagattgcttagagagggtgctgagtctagttacgacaagtttatt
gactatctcgtggacatgagtcctgccacgctggatctggaactcagaacattgcagaca
acagagccgtttacagaactcaaaagatttgtggatgcgatcaactatggtctcaagcag
aacaaaaattatgaaatcctagtggcggtggtctctgtctttctcaagatccatggagac
gtgctgtacaatgttcaaggcgaggttgtgcaagctctcgacgaatggcgttccgtggct
tctcaaatagacagcaagatggacgatatggtaaaatactgttctgcagtgatcaacttc
atcacgacaacatag

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