Ogataea parapolymorpha: HPODL_00591
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Entry
HPODL_00591 CDS
T08137
Name
(RefSeq) Vacuolar assembly/sorting proteins VPS39/VAM6/VPS3
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
opa
Ogataea parapolymorpha
Pathway
opa04138
Autophagy - yeast
opa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
HPODL_00591
04148 Efferocytosis
HPODL_00591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opa04131
]
HPODL_00591
Membrane trafficking [BR:
opa04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
HPODL_00591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
Clathrin
TPR_Vps41
Beta-prop_RSE1_1st
DUF2175
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
25770062
NCBI-ProteinID:
XP_013936026
UniProt:
W1QGJ0
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Position
III:complement(757991..760804)
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AA seq
937 aa
AA seq
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MVLVVSPYSYFEFGSHNISTFEVFGNLVYVGLYDGSLDVCQLPTGGETQMTQFDESKLVL
EDLNVIARTKLSCRAMQLELIPNLGYLVALLENQTVEIYSLNDYQFIDKFDEARFNLIRT
WYEDDKDLQLDQINEEDNDYITVDDNDSISLATTALETVRTKKFVTSLTGNSYLCLISKR
NIAVMKWHDNQYDRKYEYKLNDKIQVVEFLNSDGLIVALKNGDILKIDLAHDSVSTIQIQ
FLNQPTGFSKSFFFSPSDSLLEIFKANNDQQLIIMKDYNLIKLNSDLELVVYRRHTHSID
FKNPVLVPSHNQSGKKLKFLKYWFPYVVLVYANSLEIRNLENGSIVQQLQGTSTFGSITS
IKFTSKFLFLICNSTVYKLVKTTYDSQLAEFEKSKDYNNAINLIEKLNPLAFEDISEDHS
SRQIKFTKLRQFQLLKGLEYMKSGNYETGIKLFVEFLAPPELVLDNLPESVKTLLSGTSS
LRHAASKESLKSDKEPETRPNQDVKIIGQVISFLTDARRKLTRLLDPDSPKFQWHGFLIS
RELYGSKDISKLEQKLQTVDDCLFQCYLITNPRMVGPLLRISNYCSFDKIENKCLELKLY
TELIDFYYCRSRHDKALKLLEKLCIEEHIFKPEFMVKYIQKLGQPQLDLIFKYAEKLISL
DQTNVESIFMDDSVECESLNKHQVLDFLNKWPSLQVRYLRYLIFDLGETNIKFPNKLIEL
YLQDPANNQAHINQIYSLDNYNPSFVLKKLGSLKQSPVVLELMILPLGKLNKHKEVLDIL
VHKLNDVKKALSYCKAVYSSSPETGVKLTYMLLDMLLSSKDYDSVFEILDSGITYLDPVQ
VLEKLPGSLQLGKLEGYLESNIRNITSDLRLDIIQNELLKVQLINLKYEKLLSDAAHVRI
DASSKCMVCDKNFAASSILSFFPDGSVVHYSCSRYRN
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggtggtatctccgtattcgtattttgaattcgggtcccacaacatatccaca
tttgaggtttttggtaaccttgtatatgtggggctatacgatggttctctagacgtttgt
cagcttcccactggcggagaaacacaaatgacgcaatttgacgaatcgaaactggtattg
gaagacctcaacgtgattgcaagaacgaaattgtcatgccgagcgatgcaattggaactg
ataccaaacttgggatatctggttgcattactagagaaccagacagtggaaatatatagt
ctgaacgactatcaattcatagacaagtttgatgaggcacgcttcaatttgatcagaacc
tggtacgaggacgacaaggatctccagctagatcagatcaatgaagaagataacgattac
attacagtagacgacaacgactccatctcgctcgccactactgccttggaaaccgtccga
accaagaagtttgtcacatcattgacaggcaacagctacttgtgtctgatatccaaacgg
aatattgcagtgatgaagtggcacgacaaccaatacgatcgcaaatacgaatataagctg
aatgacaaaattcaggtggttgagtttctcaattccgatggtttgatcgttgcattgaaa
aacggtgacatcctgaaaatcgacttggcgcacgattcggtgtcaactatacaaattcag
tttctaaaccagcctactggtttcagcaagtcatttttcttcagcccgtcagactctcta
ttggaaatcttcaaggcaaataatgaccagcagctcatcatcatgaaagactacaacctc
attaaactcaacagcgatttagaacttgttgtgtacagacgacatactcattccatagac
tttaaaaacccggttttagtgccgagtcataaccagtctgggaaaaagttgaaattcctc
aaatattggttcccctatgtggttttggtctacgccaactcactagaaattcgaaacctt
gagaacggctcaattgttcagcagttgcaagggacgtccacatttggtagtattacctcg
atcaagttcacatccaagtttctgtttttaatttgcaactcaacagtgtacaaacttgtg
aaaactacatacgactcccagctggccgagtttgagaaatcaaaggattataacaatgca
ataaacttgattgagaagcttaacccattggcatttgaggacatatccgaagaccattct
tcgcgacaaatcaaatttacaaaactacgtcaatttcagcttctaaagggtttagagtat
atgaagtcaggaaattatgagacaggaatcaagttatttgtcgagtttctagccccaccg
gagctcgtacttgataatctgccagaatcagtgaaaactttgttgtctggaacatcaagt
ctaagacatgctgctagcaaggagtcattgaagagcgataaggagccagaaacccgaccc
aaccaggacgtcaagataatcggccaggttattagctttttaacagatgctcggaggaaa
ctcactcgactcttggatcccgattcgcctaaattccagtggcatggctttctcatctcc
cgtgagctttatgggtccaaggatatttccaagctagaacagaaactgcaaaccgtagac
gactgtctttttcaatgctatttgattaccaatcccagaatggtgggaccactgctcagg
atttccaactactgctcctttgacaaaatagagaataaatgtctcgaactcaagctgtac
acagaacttatagatttttattactgtcggtcacggcacgacaaggcgttgaagttgttg
gagaagctgtgtattgaggagcacatcttcaaacccgaatttatggtcaaatacatacag
aaacttggacaaccacagctggatctaatattcaagtacgcagaaaaactgatttcacta
gatcaaactaatgtggagagtatctttatggatgactcagttgagtgcgagtctctgaac
aaacatcaagtattggattttctcaacaaatggccctcgttgcaagtgcgttacttgcgt
tacctaatttttgacctcggcgagaccaacatcaagttcccaaataaactcatcgagttg
tacctacaggaccctgcgaacaaccaggcccacatcaaccaaatttactcactcgataac
tacaatccatcgttcgtgctcaaaaaactcggctcgcttaaacagtcgccagttgtattg
gagctcatgatccttcctcttggcaagcttaataaacataaagaagtgctagatatactt
gtacacaagctcaacgatgtgaaaaaagcgctgagttattgcaaggcagtttactcttcc
tcaccagagacaggagtcaaactcacatatatgctgctcgacatgctcctatcctcaaaa
gactacgactcagtttttgaaattttagactcgggcattacatacctagatccagtccag
gtgttagaaaagttgcctggatctctgcagcttggcaaattggagggctacttggagtcc
aacataaggaacataacgtcagatctccgattagacatcatacaaaatgagcttctaaaa
gtgcagctcatcaacctcaagtacgaaaaattgctctcagacgcggcccatgtgcgcatt
gacgcaagctccaaatgtatggtgtgtgacaaaaatttcgctgcctcttcgattcttagc
ttctttccagacggatctgtggtgcactatagctgtagtaggtataggaattaa
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