Ogataea parapolymorpha: HPODL_00644
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Entry
HPODL_00644 CDS
T08137
Name
(RefSeq) ATP-dependent RNA helicase ROK1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opa03009
]
HPODL_00644
Enzymes [BR:
opa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HPODL_00644
Ribosome biogenesis [BR:
opa03009
]
Eukaryotic type
90S particles
Helicases
HPODL_00644
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CbiC
Motif
Other DBs
NCBI-GeneID:
25770115
NCBI-ProteinID:
XP_013936081
UniProt:
W1QGP7
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All DBs
Position
III:<847493..>849136
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AA seq
547 aa
AA seq
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MDIFRILSRGASLKKTKGASADFSLAKPAVKNPAKKENLDIEIEKEVDFFHQKDHKKKNS
VKPEPEEEQPAFEPTLEPTRKVLTTEEALELRKSYGAKVSGDDLHLPIGSFEDLVTRFKL
NKQLLDNLISNGFTEPTPIQCEAIPACLADRDLICCAPTGSGKTLAFLIPMVQQLGKGRK
NHGIRGLVISPTKELAAQIFNELTKLCKGSSLQIGILNKSIAGKLRNRVLASSKFDILVS
TPLRLIDLIGDEVMDLSKVEEVVFDEVDKLFESKFVEQTDRILTACSNPKLRRSIFSATI
TSSVEELANSIMNSPIRIIIGHKEAANSNIEQKLVFCGNEHGKLLALREMLRKGEFKPPV
IIFLQSITRAKALFHELLYDRLNVDVIHAERTQLQRETIIDRFRKGELWCLICTDVLARG
IDFKGINLVINYDVPTSAQAYVHRIGRTGRGGRSGKAVTFYTKEDTLAIKPIVNVMKQSG
WEDGMAGWLKTDLSKLTKREKKQIKQKAVDRKPISTVPAVVRKKRKQRKEMIEASKKRKL
LEESSSN
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggatatctttcgcattctgtcgaggggagcgtcgctgaagaagacgaagggggcgagt
gctgatttttcgttggccaagcctgcggtgaaaaatccagcgaaaaaagagaatttggat
atcgagatcgaaaaggaagttgattttttccaccagaaagatcataaaaagaagaactcg
gtgaaacccgagcctgaggaggaacagcctgcttttgagccgaccttagagcccacaaga
aaggtactcaccacagaggaggctttagagctgagaaaatcgtacggggccaaggtttcg
ggcgacgatctccatctgcctattggctcattcgaggacctggtcacccgtttcaagctc
aacaaacagcttctggacaacctgatctccaatggatttactgagcccactcctattcaa
tgtgaggcgattcccgcttgtctggccgacagggacctgatctgctgtgctccaacggga
tctggtaaaacgcttgcattcttaattccaatggtgcaacaattaggcaaagggcgtaaa
aatcatgggatccgtggtcttgtgatctctccaacgaaggagctggctgcccaaattttc
aatgagctgacaaaattgtgcaaaggtagcagcctgcaaattggcattttgaacaagtct
attgccggaaaattgcgcaacagggtgctggcaagttcgaaattcgacatactcgtttcg
acgccgctgcgtctgatcgacctgattggtgatgaggtaatggacctgagcaaagtggag
gaggttgtttttgacgaggtcgacaagctgtttgagagcaagttcgtggagcagaccgac
cgcattctcacggcatgctcaaacccaaaactgcggcggtctattttctcggccaccatc
acctccagcgtggaggagctggcaaactcgatcatgaactcgccgatcagaatcatcata
ggccacaaagaggccgccaactccaatatcgagcagaaacttgttttctgcggcaacgag
catggaaaattgctggctctgcgcgagatgctgcgcaagggagagttcaagccaccagtg
atcatcttcctgcaatctattaccagagctaaggcgctgttccacgagttattgtacgac
cgcctgaacgtggacgtgatccacgccgaaagaacacagctacaacgagaaacaatcatc
gaccggttccgcaaaggcgagctgtggtgtctgatctgcacagacgtccttgcgcgagga
attgatttcaagggaatcaatttggtaatcaactacgatgtcccaacgtctgcacaggcc
tacgtgcacagaatcggccgtactggccgtggaggccgttcaggaaaggcagtgacgttc
tacacgaaggaagacacgctggcgatcaagccaattgtgaacgtgatgaagcagagcggg
tgggaagacgggatggccggctggctgaaaaccgacctgtcgaagctcacgaagcgagaa
aaaaaacagatcaagcagaaagcagtggaccgcaaaccaatcagcacggttcctgccgtg
gtgcggaaaaaacggaaacagaggaaggagatgatcgaggcctcgaagaaacggaaactg
ctggaggaaagttcaagcaattga
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