Ogataea parapolymorpha: HPODL_00661
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Entry
HPODL_00661 CDS
T08137
Name
(RefSeq) Nuclear pore membrane glycoprotein
KO
K18725
nucleoporin POM152
Organism
opa
Ogataea parapolymorpha
Pathway
opa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HPODL_00661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opa03019
]
HPODL_00661
Messenger RNA biogenesis [BR:
opa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HPODL_00661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_Pom152
Ig-like_POM152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
25770132
NCBI-ProteinID:
XP_013936098
UniProt:
W1QJT7
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Position
III:complement(877746..881588)
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AA seq
1280 aa
AA seq
DB search
MNEKPKTEESKSPLLSSGPHIKPLIPETVLDVTSQRLSIVSLFFLIQGWKIYDLYLIKND
FLREALHSSLSVNLLPPEWNFIFKYMFLDGLVVWANSVLRIPKLALKPYASVLLILVLYT
ITILLTTNLNFSFLPLFTGLIQKLHPEKELAIAEGLVNPQNLLDQSTHFKGKKMIRFLPD
SSIKLNPFNQNFCLQHTHHSKVKVPVKYNSSSELDFLQIVHTDFDNNKYTLNYTRKELKK
FLSADYSQVQGWDINYIDERVSYLELEFDKPGYYMVRQAQDVKHKNIRNYRSDLVIPRCP
NARFEDLEQLKNVCVDDELDQLSIVVTGVPPLTLVYEEEVNGELSHLPNSIIVPEDKGFH
SPLLSKDYYTGKSNMKSLDFQSNDLKDISWAKSHVITVPLASRKIEKAGDFIYTIGKVID
GFGNVVEYSPKPSDVYHFYKVKSHPLPLINFVESKPNTPILIGEEKYLELKASHVINPSA
EGPYAADIKFVPADGDLEKSKTTTHVFDFKKPAKVLAKEPGTYVLESVTSKFCSCKIGTS
TINVVQANLPRMHVSATPIVDNCVGTTGFKFAFDFIGTGPFEVAYKVSRLDPKNEKRVLS
TKDAKILRSETSTFEFDYKPPTEGSYAIEFVALSDAYYKRKVTFTHQEHRYVTYFEQRPR
AYFSENNKVTRLNVCHAEKASIDLHLDGKPPYQIAYDLIYPDYRVEKFEISDIVDHQFKI
ETGRLHLGGEYKLLLRNVTDASNCCMEFKGQEVHINVRKSSPQLSFSQSESYKFVQGKTL
LVPLKADFSQKTNLKYRFTSLDGSTSQEEVLYDFNPADGFPIKKEGIYELLEYSVDQCPG
VVSESHQVHATYLPKPKLRIVETDDLTLLSKNSYRKSTLCQLSPESIELQAIGEAPFIIE
YSIKHPSGTMEQKTEQISNKYFSIQLKTSESGDYEYAIKAVYDSIYTNDILDSLVRSGDY
RFEEIQVKQSISSLPTARFVENKKVYQTCVSSLGNLELLEEIPIRLTGRPPFDVKLGIYN
EQDGLRTLKLNKIETEKIDLLNLYEHLRIGAYQVSILEVTDSNGCFSSDFDKESVSIQVY
DVPKIRHLTDDIIHPEEQSLKRLEEISSYCVGDHINYMLTGLPPFTVYYDFNGKRQKVNV
NSNYFKRRASSEGDLSILALSDSSSKNCVVNFTSSDGKSSTRPDLKARIYDLPSVEITQG
DSIEEDIQEGDNVEIIFRFSGTPPFKLTYIRTDLVEPNRIVETEVVDNIMEHEYRIWARL
EGIYEAIEVQDAYCVARNHK
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaagccaaaaacagaagaatcgaagtctccactactgagttcggggcctcac
attaaacctttgatacccgagactgtgctagacgtcacttcgcaacgtctctcgattgtg
tccttgttttttctcattcagggatggaaaatttacgatctttacctgatcaagaatgac
tttttgagagaggctttacatagctcgctgtcggtgaaccttcttcctccggaatggaat
tttattttcaagtacatgttcctagatggtttggttgtgtgggcaaattccgttttgaga
atccccaaattggcattgaaaccatatgcatcagtgctcctgattctggttctttatact
atcacaattctgctgacaaccaatttgaatttttctttccttcctcttttcactggactt
attcaaaagctccacccagaaaaagagttagcgattgctgagggccttgttaaccctcaa
aaccttcttgaccagtctactcacttcaaaggcaaaaaaatgatcagatttttgccagat
tcctcgatcaagctcaatcctttcaaccaaaatttctgtttgcagcacacgcatcatagt
aaagtgaaagtgcctgtcaaatataattcctcgagcgaattggactttttacagattgtc
cataccgactttgataacaataagtacacactgaattacacgagaaaagagctgaagaag
tttttgtccgcagattattcacaagttcaaggttgggacatcaactatattgatgaacga
gtctcttatttggaattggaatttgataagccaggatattatatggttcggcaggcgcag
gatgtgaaacataaaaacatccgcaattataggtccgatctggtaattccaaggtgtccg
aatgcccgttttgaagatctggagcagctcaaaaatgtgtgtgtcgatgacgaacttgat
cagctatccatagtggtcactggagttcctcctttgactttagtgtacgaggaggaggtt
aatggcgaattatctcatcttccaaactcaatcattgttcctgaagataaaggctttcac
tcgcctctattgtccaaggattattacactggaaaaagtaatatgaaatccttggacttt
caatcgaatgatctcaaagacatatcttgggccaagtctcatgttataactgttccattg
gctagtcggaaaattgaaaaagcaggtgactttatatacaccattggcaaggtcattgat
ggttttggaaacgttgttgaatactcgccaaagccaagtgatgtctatcatttctacaaa
gtgaagtcgcatcctttgccattgatcaattttgttgaatctaaaccaaacactccaatt
ttgatcggagaagaaaagtatttagagttgaaagccagccatgttatcaacccatcagca
gaaggcccatatgctgctgacatcaagtttgtccctgctgatggtgatcttgaaaaatct
aagaccacgacccatgtgtttgatttcaagaagcctgcaaaagtccttgctaaagagcct
ggaacctatgtacttgaatcggtcacttccaaattctgttcctgcaaaataggcacatca
actatcaatgtggtacaagctaatcttcctcgtatgcatgtttccgcaacgcctatagtg
gataactgtgttggaaccactggattcaagtttgcgtttgattttatcggtacaggtccg
tttgaggtggcatacaaagtttctagattagatccaaaaaatgagaaacgagttctgtcg
accaaggatgccaaaatactacgttcggagacgtcgacctttgagttcgattacaaaccg
cctacagaagggagctatgcgatcgaattcgtggctctcagtgatgcatattacaaacga
aaggttaccttcactcatcaggaacaccgctacgtcacttactttgagcagagacctaga
gcttacttctctgaaaataacaaggtgactagattaaatgtctgccatgccgagaaggca
tctattgacctacacttggatggaaaacccccatatcaaattgcttacgatctcatttat
ccagattatagagtcgaaaaatttgagatttctgacattgttgatcatcaattcaaaatt
gagaccggccgcttgcatctcgggggagagtacaagttgctgttaagaaatgttacagac
gcatcaaattgttgtatggagttcaaaggtcaagaagtccatataaacgtgcgcaaaagc
tcgccccagttgagcttctctcagtcagaatcatacaagtttgtgcagggtaaaactcta
ctagtgcctttgaaggctgacttcagtcaaaagacaaatctgaaataccgtttcacatct
ctggatggttcaactagccaggaagaagttctctacgacttcaatccagctgatggcttc
cctattaaaaaggagggcatttacgagctcttggaatattccgttgaccagtgcccaggc
gtggtgtcggaaagtcatcaagttcacgccacgtatcttcctaaaccaaagttgagaata
gttgagacagatgatttgactttgctgtctaagaacagctatcgaaaatcgactctttgc
cagctatccccggaatccatagagctgcaggcgatcggcgaggctccattcattattgaa
tattctatcaaacatccaagtggaacaatggagcagaagacggaacaaatttccaacaag
tatttctccatccagctgaagaccagcgaaagtggcgattatgagtatgccatcaaagct
gtttatgattcgatatacacgaacgatatactggacagtcttgtgaggtctggcgattat
cgttttgaagagatccaagttaaacaaagcatctcttcattgcctacagcccgtttcgtc
gaaaacaaaaaagtttatcaaacgtgtgtttcgtctctaggtaacttggaactcctcgaa
gaaattccaatccgcctaacaggaagaccaccatttgatgtgaagcttggaatttacaac
gagcaggatggattgagaactctcaaactcaacaagatagaaaccgaaaaaattgacctt
ttgaatctctacgagcacttgaggatcggagcttaccaggtctccatccttgaggtgaca
gactcaaatggctgctttagcagcgactttgacaaggagtctgtcagcatccaagtctac
gatgttcctaaaatccggcatttgacagacgacatcatacatcccgaggaacaaagtcta
aaacggcttgaagaaatatcatcttattgtgtgggcgatcacatcaattacatgctaacg
ggtcttcctccattcactgtctactacgacttcaacggaaaaagacagaaagtgaacgtg
aattccaactatttcaagagaagggcctcaagtgaaggtgatttgtcgattcttgcgctt
tcagactcatcatcaaagaattgtgtggtcaacttcacctcgagtgacggcaagagcagt
actaggccagacttgaaagctagaatttatgatctaccatctgttgaaataacccagggt
gattccatagaggaagacattcaagagggtgacaatgttgagattatattcagattcagt
ggaacgccgccattcaagctcacctatatccgtaccgatcttgttgaaccaaaccgcatt
gtggaaacggaagtggtggataatatcatggaacatgaatatagaatatgggcacgctta
gaagggatttacgaagctattgaagtccaagatgcttactgtgtggccagaaatcataaa
taa
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