Ogataea parapolymorpha: HPODL_00672
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Entry
HPODL_00672 CDS
T08137
Name
(RefSeq) Serine--tRNA ligase, cytoplasmic
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
opa
Ogataea parapolymorpha
Pathway
opa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPODL_00672
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
opa01007
]
HPODL_00672
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
opa03016
]
HPODL_00672
Enzymes [BR:
opa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
HPODL_00672
Amino acid related enzymes [BR:
opa01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HPODL_00672
Transfer RNA biogenesis [BR:
opa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HPODL_00672
Prokaryotic type
HPODL_00672
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
25770141
NCBI-ProteinID:
XP_013936108
UniProt:
W1QJU7
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All DBs
Position
III:<902295..>903689
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AA seq
464 aa
AA seq
DB search
MLDIIQFIEEKGGNPQAIRESQRKRGASVEIVDEIIKEYNDWTKLRFTLDELNKTQNKLQ
KEIGQKFKAKLDASELLQKKDDLVKEKAEITAKEQEADKKLRWKVFQVGNIVHDSVIDSL
DEADNKLVRTWAPSGVNFETLSNVATATGKQAKLSHHEVLLRLDGYDPERGVKIVGHRGY
FLRNYGVFLNQALINYGLSFLTSKNYTPMQAPVMMNKDVMAKTAQLSEFDEELYKVLDGD
DEKYLIATSEQPISAYHSNEWFESPAEQLPIRYAGYSSCFRREAGSHGKDAWGIFRVHAF
EKVEQFCISEPEKSWDEFDRMIQNSEEFYQSLGLPYRVVSIVSGELNNAAAKKYDLEAWF
PFQQEFKELVSCSNCTDYQSRNLEIRCGIKAMNQKEKKYVHCLNCTLCATERALCCVLEN
YQTDDGLVVPKVLRKYIPGEPEFIPFVNELPKNSTSAKRGKGSN
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgttggatataattcagttcattgaggagaaaggcggtaatccacaggccattcgtgaa
tcacaaaggaaaagaggtgcgtctgttgagattgtggatgagatcatcaaagagtacaat
gactggactaagctaagatttacattggatgagctaaataaaacacagaataaactacaa
aaagaaatcggtcagaagtttaaggctaagctagatgcatctgaactcctgcagaagaaa
gatgatttggttaaggaaaaggccgaaattacagctaaagagcaggaggcagataagaag
ttacgttggaaagttttccaggtcggaaatattgtccacgattctgtcattgattcgttg
gatgaagcagacaataagctagtcaggacttgggctccctccggcgtgaattttgaaaca
ctaagtaatgtcgcgacagcgaccggaaagcaagctaagctttcccaccatgaagtgttg
cttagactagatgggtacgaccctgaaagaggtgtcaagattgtgggtcacagaggatac
tttttgagaaattatggagtttttctgaaccaggccttgatcaattatggtttgagtttc
ttgacctctaaaaactatactcccatgcaggcgcctgtaatgatgaacaaagatgttatg
gccaagactgcacaactttctgagtttgatgaagagctttacaaagttcttgacggagat
gatgagaagtatttgattgcaacttctgaacagcctatctcagcttatcattccaacgaa
tggtttgaaagtcctgctgaacagcttcctattagatacgcaggctattcctcttgtttc
agaagggaagcaggttctcacggaaaagatgcctggggtattttcagagttcatgctttc
gaaaaggttgaacagttttgcatcagtgagcctgaaaagtcatgggatgagtttgacaga
atgattcagaattctgaagagttttaccagtctttgggtctgccttacagagttgttagt
atcgtttcaggcgagctcaataatgctgctgcaaagaagtatgacctcgaagcctggttc
ccattccaacaagagtttaaggaactagtttcgtgctccaactgcactgactaccagtca
aggaatttagaaatcagatgtggtatcaaggccatgaatcagaaggagaaaaaatatgtt
cattgcttgaattgtaccttatgtgccactgaaagagctctttgctgtgtcttggaaaac
taccagactgatgatgggctggtcgttccaaaagttctcaggaagtatattcctggagaa
cctgaattcattccatttgtcaacgaactcccaaaaaattcaacctccgctaaaagaggc
aaaggttccaattga
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