Ogataea parapolymorpha: HPODL_00703
Help
Entry
HPODL_00703 CDS
T08137
Name
(RefSeq) hypothetical protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
opa
Ogataea parapolymorpha
Pathway
opa03018
RNA degradation
opa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HPODL_00703
09123 Folding, sorting and degradation
03018 RNA degradation
HPODL_00703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opa03019
]
HPODL_00703
03041 Spliceosome [BR:
opa03041
]
HPODL_00703
Messenger RNA biogenesis [BR:
opa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
HPODL_00703
mRNA degradation factors
5'-3' decay
Lsm complex
HPODL_00703
Spliceosome [BR:
opa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
HPODL_00703
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
SM-ATX
Gemin6
Motif
Other DBs
NCBI-GeneID:
25770172
NCBI-ProteinID:
XP_013936139
UniProt:
W1QI84
LinkDB
All DBs
Position
III:<963164..>963499
Genome browser
AA seq
98 aa
AA seq
DB search
MSALKSFLDEKVKVVTSDGRLFIGVLEGFDQSSNIVLSKSFERIFSPTEPTKDLELGSYL
IRGEQIVIVGMLDDEEESQTDYDKIHGFQLKDTKNALR
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctttgaagtcttttctagatgaaaaagtcaaagtggtaacttcagacggcaga
ctgtttattggagttcttgaaggatttgatcagtcctcaaatattgttctttcaaaaagt
ttcgagcgcatattctctccgactgaacctacaaaagacctagagctcggatcatatctc
atacgaggagagcagattgttatcgttgggatgctggacgacgaagaagaatcacagacg
gattacgacaagatacatggctttcaactcaaagacacgaagaatgcgcttagatag
DBGET
integrated database retrieval system