Ogataea parapolymorpha: HPODL_00727
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Entry
HPODL_00727 CDS
T08137
Name
(RefSeq) Transcription factor SPT20
KO
K11361
transcription factor SPT20
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opa03021
]
HPODL_00727
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_00727
Transcription machinery [BR:
opa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
HPODL_00727
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
HPODL_00727
SLIK complex
HPODL_00727
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt20_SEP
SEP
Tic110
Motif
Other DBs
NCBI-GeneID:
25770196
NCBI-ProteinID:
XP_013936164
UniProt:
W1QIA8
LinkDB
All DBs
Position
III:complement(<1003325..>1005082)
Genome browser
AA seq
585 aa
AA seq
DB search
MSNNTQAHMMRLLNSIQPPPGMTRQQRLEQMIQTGELKDEDILLLKRHQQMIKQQQAQLH
AAQAAGQLTPQQQQQLVQKKLAQQQQQQQQQSQPGQRNFLGLSQEQLAKLNPQQRKMLMI
QQLRRRAKTQRFYESSDEILKKFESYPASLEFHIHENHYRFGNQDAIIPKSSPTVKEFLE
YVAKGEIPEPLVEVIKDGGVQLYDGSLILKVYDHRNLIPIKQEKQEPSDGKQDKPETKTK
PKEYRTVLRFTQLAQYDDLSYQADTQQFHDTFALTFESEVLTATNRNINLQPILNPYHYD
KSLRPYDMVVPEYDPETDKMKFVHRADAREVDQDGQKTSLYPLSYRNYPYKPLHEDLPHT
NSKYEQLMTILSESYTHNNRLSESAKTNTNEPGQFQRLRFVEMWRHKVELIKQAAISGGM
NPNASDPSMNGLLGGMTQQQRALINQERMLNQRQKEQMASAVAAAGHPHAMKPVDSRQGS
APVPNMNGNFMARGVSTPVPHSMPGSMPGSMPGPASAGADMTPGRDKKGAKKIRKPTKRQ
ATAGPVSSPSPSMYQQIPGAYSPMDEPARKRRMPYKQQPDSGTPS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaacacccaggcgcacatgatgcggctgctgaactcgatccagccgccgccc
gggatgacccgtcagcagcggctcgagcagatgatccagaccggcgagctcaaggacgag
gacatcctcctgctcaagcgacaccagcagatgatcaaacaacagcaggcccagttgcac
gctgcgcaggccgcgggccaattgacgcctcagcagcagcaacagcttgtccagaagaag
ctggcacagcagcagcagcaacagcagcagcaatcgcagccgggccagcgaaactttctt
ggtctgagccaggaacagcttgccaaactgaacccgcagcagcgcaagatgcttatgatc
cagcagctgcgcagacgtgcgaaaacacagcgattctacgagagtagcgacgaaattctg
aaaaaattcgagagctatccggcctcgctggagttccacatccacgagaaccactatcgg
ttcggcaaccaggacgccatcatcccgaaaagctcgccgaccgtgaaggagtttttggaa
tacgtggcaaagggcgagatccccgagccgctggtggaggtgatcaaggacggcggagtg
caactatacgacgggagcctaattctgaaagtttatgaccacagaaacctaattcccatc
aagcaagaaaaacaggagccgagcgacggcaagcaggacaaaccagagacgaaaacaaag
ccgaaagagtaccgcaccgtgctgcggtttacgcagctggcacagtacgacgatttgtcg
taccaggccgacacacagcagttccacgacacttttgcgctgaccttcgagagcgaggtg
ctcactgcaaccaatagaaacatcaatctgcagccgatccttaatccgtaccactatgac
aagtccttgcggccatacgacatggtggtacccgaatatgacccggaaacagataaaatg
aagtttgtgcaccgcgccgacgcacgagaagtcgaccaggacggccaaaaaacgagtctt
tatccgctatcctacagaaactacccgtacaagccgctgcacgaggacttgccgcacaca
aactccaagtacgagcagctgatgacgattctgagcgagtcgtacacgcacaacaaccgt
ctttcagagtcggccaaaacaaacaccaacgagccgggccagttccagcggctgcggttc
gtcgagatgtggcgccacaaggtggagctaatcaaacaggcagcgatttccggtggcatg
aacccgaacgcaagcgatccgagcatgaacgggctgctgggcggcatgacgcaacaacag
cgcgcgctcatcaaccaggaacgaatgctcaaccagcggcagaaagagcagatggcctcg
gccgtggcagcagcaggacatccgcacgccatgaagccagtagactccagacaaggctcg
gcgccggtgccgaacatgaacggcaactttatggcgcgcggtgtttccacgccggtcccg
cactcgatgcccggctcaatgcccggctctatgcccggccctgcgtcggcgggagcagat
atgacaccaggaagagataaaaagggagccaaaaaaatacgcaagccaacaaaaagacag
gccaccgcaggacccgtctcatcacctagtccgtccatgtaccagcaaatcccgggagca
tactcgccgatggacgagccggcacgcaaaagacgcatgccctacaaacagcagccagac
agcggcaccccttcgtaa
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