Ogataea parapolymorpha: HPODL_00734
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Entry
HPODL_00734 CDS
T08137
Name
(RefSeq) RNA polymerase-associated protein RTF1
KO
K15178
RNA polymerase-associated protein RTF1
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opa03021
]
HPODL_00734
Transcription machinery [BR:
opa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
HPODL_00734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
25770203
NCBI-ProteinID:
XP_013936171
UniProt:
W1QGX7
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Position
III:complement(1015736..1017283)
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AA seq
515 aa
AA seq
DB search
MSDSDDDLLALAGIGSEGDESDYEPEIQTTKRAGGLKRKIDESEGEQDNDDDEYGEQDPY
PLEGKYKDDADKAELLAMDEVTREQIIYDREQEREKYRERRFLALRARQSKAESSAIKAS
RTTGKSLRTSKLSELKKQRERKNRKESRAYDSDEDDVDANELADEQEGSEDEEMYEEDYD
IDDTDTRRKKHTTSDYDDKYYQDATLKDLNAKVRASRTILSRFMFRDEFDEVIRNTYVRV
NIGVSRETGQPQYRIARVEEVKRGGKPYRLLNKPCDVYLLVSQGESKKLIDMACISDSPF
SPSEFEAYRRRLEESGLELPSVGQVDAKFRELRDMSTRKLTDEDINKMVARKEAISVAAM
DSGNRVKRLARLREELQVAVEQQDEARVETLTKQIDELGKYVHAGHNELSRMDQINLRNK
KSNETAIRRAEKLNVEHRQKQILNNNFNDPFSRLRTNPKIFYSSAQSAQKEMAGEEQPVP
EHTEHREESPLKCQFIRDGVDAVIGTIDFDVQLQI
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacagcgatgacgatttgttagcgcttgctggaatcggttcggagggagacgag
agcgactacgagccggaaatccagaccacgaagcgtgcgggcggcctcaagcgcaaaatc
gacgagtcggagggcgagcaggacaacgacgacgacgagtatggcgagcaggacccgtac
ccgcttgaaggcaagtataaagacgatgccgacaaggcggagttgctggcgatggacgag
gtgacgagggaacagatcatctacgaccgtgagcaggagcgcgaaaagtacagggaaaga
cggttcctagccctgagggcgcggcagagcaaggcggagagcagtgctatcaaggcatcg
cggacaacgggcaagtctttgcggacgagcaagctgtctgagctgaaaaaacagagagaa
aggaagaacagaaaggaaagcagggcatacgactctgacgaggatgatgtggacgctaac
gagctggcagacgagcaggagggctctgaggacgaggaaatgtacgaggaggattacgac
atcgacgacacagacacgcgtcgcaaaaagcacaccaccagcgattatgacgacaagtac
taccaggacgcgacgttgaaggacctgaacgccaaggtgcgtgctagtcggacgatattg
tcgcggttcatgttccgggacgagtttgacgaggttatccgcaacacatacgtgcgtgtg
aacattggggtgtctcgggagacgggacagccgcagtacaggattgcgcgagtcgaggag
gtgaaacgcggtggaaaaccgtaccggctgctgaacaagccgtgcgatgtgtacttgctg
gtgtctcagggcgagtcgaagaagctgattgatatggcgtgcatctcggactctccattt
agcccgtctgagtttgaggcgtaccggagacggctggaggagtctggactggagctgccg
tctgtgggccaggtggacgcaaaattccgcgagctacgggacatgtcgacgagaaaattg
acggacgaggacatcaacaagatggtggccagaaaggaggccatctctgtggcggcgatg
gactcgggcaatagagttaaacggctggcccggctgcgggaggagctgcaggtggctgtg
gagcaacaggacgaggctcgtgtcgagacgttgacgaagcagatcgacgagctgggcaag
tacgtgcatgcgggacacaacgagttgagcagaatggaccagatcaacctgcgcaacaag
aagagcaacgagacggccattcgccgggccgagaagctgaacgtggagcaccgccagaaa
cagattttgaacaacaacttcaacgacccgttctcgcggctgcgcaccaacccaaagatc
ttctactcatctgcacagtctgcgcagaaggagatggccggcgaggagcagccggtgccg
gagcacacggagcaccgcgaagagtcgccgctcaagtgccagttcatcagggacggcgtc
gatgcggttattgggacgatcgacttcgacgtccagctgcagatatag
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