Ogataea parapolymorpha: HPODL_00742
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Entry
HPODL_00742 CDS
T08137
Name
(RefSeq) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
opa
Ogataea parapolymorpha
Pathway
opa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPODL_00742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opa03400
]
HPODL_00742
Enzymes [BR:
opa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPODL_00742
DNA repair and recombination proteins [BR:
opa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPODL_00742
Prokaryotic type
HPODL_00742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Aida_N
zf_C2H2_ZHX
Polysacc_deac_3
Motif
Other DBs
NCBI-GeneID:
25770211
NCBI-ProteinID:
XP_013936179
UniProt:
W1QIE1
LinkDB
All DBs
Position
III:complement(1027883..1028842)
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AA seq
319 aa
AA seq
DB search
MNKVSPKMAQKRTITDFFTVKRQKSDSVAKSVVSEAQVAGKTDSVKKQITLQVTTTSSFD
KQKWVNSLTPEQKDLLELEISSMEPSWLALLHQELTKPYFLGLKRFLLSEWKSQTIFPPK
ENIYSWTRLTPVNNVKVLVLGQDPYHNYNQAHGLAFSVQDPTPPPPSLKNIYKCLKKEYP
NFEIPKKGDLTKWAQNGVLMLNTCLTVRAHNANSHSGKGWEQFTMQVIKKLIEHRNRNGK
GLAIVAWGSPAQKTVFNVGKIDWSLNLFLKSVHPSPLSAARGFFDCQHFTKCNAWLEDKY
GKDARIDWALVDGNTVLEN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggtgtctcccaagatggcgcaaaagcgcacaatcaccgactttttcacggtg
aaaagacagaagtcggactctgtggccaagagcgtggtgtccgaggcacaagtggccgga
aagacggactcagtcaaaaaacaaatcactctccaggtgaccaccacaagctccttcgat
aaacagaaatgggtcaactcgttgactcctgagcaaaaagatctgctcgagctggagatt
tccagcatggagccgtcctggcttgctcttctgcaccaggaactgaccaaaccttatttc
ctgggtcttaagagattcctgctctctgagtggaagtcccagacaatcttccctcccaag
gagaatatctattcgtggacgcgtctgacgccagtcaataacgtcaaagtgcttgttctt
ggccaggacccgtaccacaactacaaccaggcacatggtctcgcgttctctgtccaagac
ccgactccgccaccaccctctctgaaaaacatctacaagtgtctgaaaaaagagtatccg
aacttcgagatccccaagaagggcgacctcaccaagtgggcccaaaatggagtccttatg
ctcaatacgtgtctcacagtgcgcgcccataacgccaactcacactcgggaaaaggctgg
gaacagttcaccatgcaggtcatcaagaaattgattgagcacagaaacaggaacggtaag
ggtctggccatcgttgcatggggatcgcctgcccagaagaccgtgttcaacgtcggtaag
atcgactggagtctgaacctgtttctgaagtctgtccatccatctccgctcagtgccgca
cgcgggttctttgactgccagcatttcaccaagtgcaacgcgtggctggaagacaaatac
ggcaaggatgcgagaatagactgggccctggtggacggaaatacagtgttggaaaattaa
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