Ogataea parapolymorpha: HPODL_00795
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Entry
HPODL_00795 CDS
T08137
Name
(RefSeq) ATP-dependent RNA helicase DBP9
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opa03009
]
HPODL_00795
Enzymes [BR:
opa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HPODL_00795
Ribosome biogenesis [BR:
opa03009
]
Eukaryotic type
Pre-60S particles
Helicases
HPODL_00795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
25770264
NCBI-ProteinID:
XP_013936233
UniProt:
W1QKQ8
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All DBs
Position
III:complement(1117022..1118650)
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AA seq
542 aa
AA seq
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MSVSVAQDYVDEGVSFESFDLDARLIQAINKLGFEHPTLIQTQTIKLSLEERKDIIARAS
TGSGKTAAYCIPIVQSILASGSDSEGVKALVLVPTKELSKQVAEFLGQLTVFCGRSARVL
NLNDNVSEQVQLQLLNEGREIYVSTPAKLISVLEKNKSIQLTNLRFLVIDEVDLMVSYGY
KDDLDKLGEYLSTKTNTQTFLMSATLNEEVTELKTKFCNKPAVLKLEDVDSDKKKLVQYY
IKTNELDKFLLIYVILKLGLIKGKILLFVNELDRGYKLKLFLQNFGIKSCLLNSELPVNS
RLHIVEEFNKNVYNLLIATDEANQEGQSNDFGVSRGVDFKNVACVLNFDLPVSSKTYVHR
VGRTARGGKSGMALSFVVAAKEWGKHKASSLASAKKDEKVLARIERSQSKLGYELKPYQF
NMKQVEAFRYRMEDSFRSVTRAAVRDARLREIKQELMASEKLKRHFEENPQDLVTLRHDK
DLASVRADAHLKRVPTYLLPEGARPEEKKVGFVPFNKVRKGRGKKRGKKVDVLKGVGKRR
KT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtctctgttgcgcaagactacgtcgatgagggcgtcagttttgagtcctttgat
ttagatgcgcgtctaattcaggccattaacaagcttgggttcgagcacccgacgctgatc
caaacacagacgatcaaactgtctctcgaggaacgcaaggacatcatagccagggcgtct
acaggctctggcaaaactgcagcatactgcataccgattgtgcagtctattttggcgtca
ggcagtgactcagagggtgtgaaagcgcttgttttggttccgaccaaggaattgagcaag
caggtggctgaatttctgggtcaattgacggtgttttgcggcaggtctgcacgtgtgctg
aacctgaatgacaacgtgagtgagcaagtgcagttacagctgctcaacgagggtagagaa
atatatgtgagcactcctgcgaaattaatatcagttttggagaaaaataagagtatacag
ttgacgaatctgcggtttttggtgatagacgaggttgatctgatggtcagctatggatac
aaggacgatttggacaaattgggagaatatttaagcaccaagacaaacacacagactttt
ctcatgagtgccacgttgaacgaggaggtgacggagctgaagacgaagttctgtaataaa
cctgctgttctgaagctggaggacgtcgacagcgacaagaagaagcttgtccagtactac
atcaaaactaacgagctcgacaagttcctgctgatctacgtgatattgaagctgggccta
attaaaggaaaaattctgctgtttgtgaacgagctggaccggggatacaagctcaaactt
tttttgcagaacttcggcatcaaatcgtgtttgctgaactctgagcttccagtgaactct
cggctgcacattgtggaggagttcaacaaaaacgtctacaatttactaattgcgaccgat
gaggccaaccaggagggccagtcaaacgactttggtgtctcgcgtggtgttgattttaag
aacgtggcatgtgtgctgaacttcgatcttcctgtctcgtccaagacttatgtgcaccgt
gttggacggacggccagaggcggcaaaagtggcatggctctgtcgtttgtggtggcagcc
aaggaatggggaaaacacaaggcctcgagtttggccagtgcaaagaaggacgagaaggtt
ttggccagaatcgagcggtcgcagagcaagctcgggtacgagctcaagccgtaccaattt
aatatgaaacaggtggaggcgttccggtaccggatggaggactcgttccggtccgtgacc
cgtgcggctgtgcgagatgcccgactacgggagattaaacaggagctgatggcctctgag
aagctgaaacgccattttgaggagaacccgcaggacctggtcactttgcgccacgacaaa
gacctggccagcgtgcgtgcggacgcacatctgaaaagagtgccgacgtacctgctacca
gagggggcgcggcccgaggagaagaaggttgggtttgtgccgttcaacaaggtgaggaag
ggccgtggcaagaagagaggcaagaaggtggatgtgctgaagggggttggaaagagaaga
aaaacatag
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