Ogataea parapolymorpha: HPODL_00930
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Entry
HPODL_00930 CDS
T08137
Name
(RefSeq) Abundant subunit of the nuclear pore complex (NPC)
KO
K14312
nuclear pore complex protein Nup155
Organism
opa
Ogataea parapolymorpha
Pathway
opa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HPODL_00930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opa03019
]
HPODL_00930
Messenger RNA biogenesis [BR:
opa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HPODL_00930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
25770397
NCBI-ProteinID:
XP_013934848
UniProt:
W1QEP1
LinkDB
All DBs
Position
IV:complement(64238..68488)
Genome browser
AA seq
1416 aa
AA seq
DB search
MSVHFGQVLGFGAPVDTKKETKLEVTELQKRRAARRTNAALSNGTSSGIGSLFPTASLTS
SLSAGFNSSQLMKYQPSSEKSLPLLSSTAPLSLVDQCIHIAIEKDNTTPALSEVLTKYAI
DSYNYKANGSLGPFSRFEKSNIYNIPDQIFQEYNSLDCITNMGILTELQRAWLTIDNKLI
IWNYKAGSHDPDYFTIDELKNTILTVKLVKPKPKVFVDSVNYLLIVATSMDIHILAVEYT
PSSLVISDTKMSVPAHGLVVNKIVSFDQTNDIFFTGIGDGENVWRLTYSNTDEWFQRNCY
KECLTKSGLSSVVPNYNVFQKFPGLRGQENDPKTETIIQLEIDSTRKILYTLSSKSTIRA
YRLKITDGKVELGASVVKRPYNILKDLATTTFNLQSSLLKKDGFKIVNIFPITKNESDNL
FLVAVTNTGCRLYVNGSTIYERLAFTTSYVKFPPPDSSFHEKLESLKAQQLHDQSFMSNG
IKSEGTKSITKNPVLNDITPQDLKAAQENSKLLSNIKESLIVSPGIFFCHSEDHLYSSVP
DYGVLKHSLQYVEDFEELDRIQSIHSIVPITPSFHATNTPKGYCNQFASQYLAPPLEVAA
LTSTGIHVYRYRTPDMILEDSLNDKTFSEFSRKYGSREACSTALYLACKYRQGDNFRNMA
TKFYISGGKNSSLNKNLPAIVDNVELSDRFYAVILLLSRLVREFWDKEIFQLDPNVKFNR
NGYIDEESLKKLKNEKVLLAGLSITKHELEYFLCSLIIILNFFEENKKTIPGLLGPLYET
GTNSKETELCLQAENIGFNAILKFLGSVKEGLSFLAILYDDENTGKNFADVMSYLTLQSQ
ADLSCLTFCEFFSSKDQTTSKLVKEILSSVINKSIAAGDSVELVATTLQEKCGSFCSTGD
VLIFKAIESLKKAKDFASSNDNENKMKHLKAATQLLSQTSDALTFETINDLVGVMLQLDY
YTGAIELLLTIASASDPTNLALKYDLDGQVSVMVDDPKKLAFEKRVKLYELIFKILIDID
EKAIVSLEQAANNTSFTDAKAPISYFGSDGQLMTHYSELRDQSYEICLKSQDRLFHYEFY
KWLVKIGVGERLLDLETSFVLDFLKDYSPKDMEMAKLLWIYYSRRENYFQAAKVLFDLSI
SKFDIDLANRIQFLSRANGFCNCVCPPDLRQEMTFLSVTIGDLLAVANLQDELLLTILDD
ERVSDLAKQVAVRKLNGRVLPISDLYNNFIDPLGYYTLALVTFKISDHRNSEDILSQWEN
LLNKWYYKNKDSGEPFFSEINNEFIAVASRVSDTEVLFPIVELFQLLAKYFYSSDYCPEQ
LTPPTGVLIDAFIRSGVSFGKLYYNLRDLVESTTFELFDGYSRVLKQEMCYLIKEWFKND
KKLRDVLSSDSVRDLSDYSVDTDPVFAYIKSTGNPL
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcattttggccaggtgctaggatttggggctcctgtggacacaaaaaaggaa
acgaagctcgaggtgaccgagcttcagaaaagaagggctgccagacgcacgaatgccgcg
ttatctaatggcacgtcctctggcattggatctttgttcccgaccgcaagtctcacgtcg
tcgctatctgcaggcttcaactcgtcgcagctgatgaaataccagccgtccagcgaaaag
tcgcttccgctgctgtcctcgaccgccccattgagtctcgtggaccagtgcatacacata
gcaattgagaaagacaacaccaccccggcattgagcgaggttctaaccaagtacgcaatc
gacagctacaactataaagccaatgggtcgctcgggccattttcgcggtttgaaaagtca
aacatttacaacatccccgaccagatcttccaggagtacaacagcctggattgcataacc
aacatgggcattttgacagaactgcaacgggcctggttgacgatcgacaacaagctgatt
atatggaactacaaggcaggctcgcacgacccggactactttacaattgacgagctgaaa
aacaccattctcacagtgaaactggtgaagccaaaaccaaaggtttttgtggacagcgtc
aactatttactgattgtggccacttccatggacattcacattttggctgtggagtatacg
ccgtccagcttggtgatctctgacaccaagatgagtgttcctgcacacggtctcgtggtg
aacaaaattgtttcctttgatcagacaaacgacatattctttaccggaattggagacggc
gaaaatgtgtggcggttgacatactccaatacggatgagtggttccagcgcaactgttac
aaagagtgcctcaccaagtcgggtctctcgtctgtcgtgccaaactataacgttttccaa
aaattcccgggactacgaggccaagaaaatgatcctaagacagagaccatcatccagctc
gagattgactccaccagaaaaattctgtataccctatcttcaaagtcaacaatcagggcc
tacagactaaagatcacagacggaaaagtcgagctcggcgctagcgtcgtgaaaaggcca
tacaatattctcaaagacctggctactaccacattcaaccttcaatcatccttgctgaag
aaagacgggttcaaaattgtgaacattttcccgatcacaaaaaacgagagcgacaatctg
tttctggtcgctgtaaccaacaccggttgcagattgtacgttaacggaagcacgatatac
gagagactggctttcacgaccagctatgtgaaatttccgcctccagactccagcttccat
gaaaagctggaatcactgaaagcccaacagttgcacgaccagagctttatgtccaatgga
atcaaatccgaaggtacgaagtcgatcaccaagaacccagtattaaacgatataactcct
caggatctcaaggctgcgcaagaaaactccaaactcttgagcaacatcaaggagtcgctt
atagtctcgccaggtatatttttctgtcatagtgaggaccatctttacagctctgttcca
gactacggtgttctcaaacattcattgcaatatgttgaagacttcgaggaactagataga
atccagtcgattcattcgatagtacctatcaccccaagcttccatgccacaaacactcca
aaaggatattgcaatcagtttgcatctcaatatttggcccctccactggaggtcgcagct
cttacttctaccggtattcacgtctaccgctacagaactccggatatgatattagaagat
tcgctcaatgacaaaacgtttagcgagttttccagaaaatatggttcacgcgaggcgtgc
tccactgcattgtacttagcatgcaagtaccgacagggggacaatttcaggaacatggct
accaagttctatatttcgggtggtaaaaattctagcctcaacaaaaatctaccagctatt
gttgacaacgtggaactaagtgatagattttatgctgttattcttttgctttcaagattg
gtgagggaattctgggataaggaaattttccagcttgacccaaacgtgaaattcaatagg
aatggctatattgacgaggagtcactaaagaagctgaaaaatgaaaaggtgctactcgcg
ggactcagcattaccaaacatgagcttgaatactttttgtgctcgcttatcattatattg
aacttcttcgaagaaaacaagaagacaataccaggattgctcggacctttatacgaaaca
ggcacaaatagcaaagaaactgagctttgtctgcaggccgaaaatattggattcaatgct
atcctcaaatttcttggaagtgtgaaagaaggtctttcatttctggcaattctctacgat
gacgaaaacactggtaagaattttgcggatgtgatgagctatctcaccctccaaagtcag
gctgatctcagctgtttgactttctgcgaatttttcagttctaaggatcaaaccacatcc
aaactggttaaggagattctttcctctgtgattaacaagagcattgctgctggtgactcg
gtcgagcttgttgctactaccttacaagaaaaatgcggttccttctgttcaaccggagat
gttctaatatttaaagccattgagagtctgaaaaaggccaaagattttgcatcgtctaat
gacaacgagaacaaaatgaaacacctaaaagctgccacacagctgttgagtcaaaccagt
gacgctttgaccttcgaaacaattaacgacctggttggtgtaatgcttcagctggattac
tacactggagcaatcgagctgctcctcacaattgcttctgctagcgacccaacgaatctt
gcgctaaagtatgatcttgatggccaggtctcggtgatggtggacgatcctaagaaactg
gcctttgaaaaaagggtcaaactctatgagctcattttcaagatcctgatcgacatcgat
gagaaggccattgttagcttggaacaggcagctaacaacaccagtttcacggacgccaag
gctccaatttcgtattttgggtccgatggacaactaatgacccattattccgagctgaga
gaccagagctacgagatctgcctgaaaagccaggacagattgttccattacgagttttac
aagtggttggtcaagatcggcgttggtgaacgcttattagacctggagacgtcattcgtt
ttagacttcctaaaagattattctcccaaggatatggagatggccaagctactgtggatt
tactactctcggagagaaaattacttccaggcggccaaagtgctttttgatctgtccatc
tccaagttcgatatcgatctggcaaacaggattcagttcctgtcgcgagccaatggattc
tgcaattgtgtttgtccaccagacctaagacaagaaatgacgtttctttctgtgaccatt
ggtgatctgcttgcggtggccaacttgcaagatgagcttctcctgactattctggacgac
gaacgtgttagcgatttggccaagcaagtggctgtcagaaagctgaacggaagggtgctg
ccgatcagtgacttgtacaacaatttcatcgatcctcttgggtattacactctggccctg
gtgacgttcaaaatctcagatcaccgtaactcagaggatattctgtcacaatgggagaat
ctcttgaacaaatggtattacaaaaataaggactccggagagccatttttttccgagatc
aacaacgagttcattgctgtggcttctcgagtttccgacactgaggttctgttcccaatc
gtggagctgttccaactgttggcaaagtatttctactcgtcggattattgtccggaacag
ctcacaccgcctacaggggttctgattgacgctttcattcgcagtggagtctcgtttgga
aaactgtactacaatctcagagacctggttgagtcaaccacgttcgaacttttcgatggc
tactccagagtgctcaaacaggaaatgtgctatctaatcaaggagtggttcaagaacgat
aaaaaattgcgagatgttctctcttctgactctgtgagagacctttctgactactcggtt
gacactgatcctgtctttgcatacatcaaatcaacgggcaacccgttgtga
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