Ogataea parapolymorpha: HPODL_00984
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Entry
HPODL_00984 CDS
T08137
Name
(RefSeq) hypothetical protein
KO
K18717
nucleoporin ASM4
Organism
opa
Ogataea parapolymorpha
Pathway
opa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HPODL_00984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opa03019
]
HPODL_00984
Messenger RNA biogenesis [BR:
opa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HPODL_00984
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
25770451
NCBI-ProteinID:
XP_013934906
UniProt:
W1QG95
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All DBs
Position
IV:164368..165480
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AA seq
370 aa
AA seq
DB search
MSHITAADSQESRFSKYKLKEDLYKEPEWLSSGNNKLLIGGTGARSKKRSIPTTLIKRTS
KLLGETNDDSDSPSQPALPFQSGVQRKRFAGDAVAADHETTSIDEFQDLPPKVSLYDRMN
NDDSSGNVLLINNPDFGKFESDPNSYKNVFNRVQRSRVPVGSSESGNPELPFSVGKIDSL
NDKEKDAEPTIRETAVIVYGYDDSQFASVVEQFSKYGTILEDFNQRKFLSQSKSYPVFIG
PQWVKFTYDNSASAVRALRENNKLGASGSVIGVVPYTRSSLEKLLGTSIPDNQDIGCSMS
LVKLVSDQKLPEIELSTVFAAEGGNHEERQDGRFRLKDGSGLINVPKTAKKENKGFLERG
MKLVFGAGEV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatataacagctgctgattcacaggagtcgcgcttttcaaaatacaagcttaaa
gaggatttgtataaagagccagagtggttaagttcaggaaataacaaattactcattggt
ggaacgggcgcacgatcaaagaagagaagcataccaactactctcataaaaagaacaagc
aaacttctaggcgaaacgaacgacgattccgatagtccgagccagccagcactaccattc
caatccggcgtccaaagaaaacgctttgcgggtgatgctgtcgccgccgaccacgaaacg
acatccatagatgagttccaagatcttcccccaaaagtgtccctctatgatcgcatgaat
aatgatgacagttccggtaatgttttactgatcaacaacccagatttcggtaaatttgaa
tccgatcctaatagctacaaaaacgtcttcaacagagtgcaacgaagcagggttcctgtt
ggatccagtgagtcagggaacccagaactccccttctccgtgggcaagatagattcattg
aacgacaaggaaaaggatgcagaaccaacgataagagaaactgcagttatagtgtatgga
tatgatgattcgcagtttgcctcggttgtggagcaattctcaaaatatgggacaatactg
gaggatttcaaccagcgtaagtttttgagtcaaagcaagagttaccccgtatttattggg
ccgcagtgggtgaaattcacatacgacaattcggcttctgcagtgcgtgctttgcgtgaa
aacaataaattaggtgcatcaggctcggtgataggagtggtcccttacacgagatcgtct
ctagaaaaattgctagggacgtctatcccagacaatcaagatattggatgttctatgtcg
ctggttaagcttgtgagcgaccaaaaactaccggaaatagagctctccaccgttttcgct
gctgaaggcggcaatcacgaagaacgtcaagacggcaggtttagactcaaggacggtagt
ggccttatcaacgttccaaaaactgccaaaaaggaaaataagggatttttggagcgtggc
atgaagcttgtatttggagcaggagaagtttag
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