Ogataea parapolymorpha: HPODL_01066
Help
Entry
HPODL_01066 CDS
T08137
Name
(RefSeq) Mitochondrial methionyl-tRNA synthetase (MetRS)
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
opa
Ogataea parapolymorpha
Pathway
opa00450
Selenocompound metabolism
opa00970
Aminoacyl-tRNA biosynthesis
opa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HPODL_01066
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPODL_01066
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
opa01007
]
HPODL_01066
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
opa03016
]
HPODL_01066
Enzymes [BR:
opa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
HPODL_01066
Amino acid related enzymes [BR:
opa01007
]
Aminoacyl-tRNA synthetase
Class I (U)
HPODL_01066
Transfer RNA biogenesis [BR:
opa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HPODL_01066
Prokaryotic type
Other AARSs
HPODL_01066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
25770531
NCBI-ProteinID:
XP_013934994
UniProt:
W1QF55
LinkDB
All DBs
Position
IV:317719..319338
Genome browser
AA seq
539 aa
AA seq
DB search
MIRSSILRIGRRSLSSKTAVITTPIFYVNAKPHIGHYYSMTLADVYNRWLKLSGESTFFT
TGTDEHGLKVQTAAAVAGMDPKTFCDGLSQKFRELASVGNIQYDRFIRTTDPDHLEAVQF
FWKTLEEKGHIYKGKHCGWYSVSDECFYAETEIEEVDGKMVAKETGATVVYETEENYFFR
LSEHQQRLIQFLKDNPSFVQPPLYYQTLLRDLKSRDLEDLSVSRPSSRVSWGISVPNDPS
QKMYVWFDALINYLTCIGYPSQIPQEPSFVHLVGKEIVKFHCIHWPSFLMACELPLPRGV
FVHGHWLMDGRKMSKSRGNVADPVEISEKYETDALRLFMMRYSVLDSDCDYSESKLNATR
NEFIDKFCNLLTRSLSKKFSISRALAKVETRGLASLLDEAGEEFSADLRSLYEQVDELPA
TIDPHLRKMELHKAVLAIWQLLPRINGLFDQYEPWRLKGPDNELMQDLVIFSALDSLRCL
LILLQPVVPDYTKMLLDKLQVEPSKRTLDMAGIARDTSYAKSATFSKGEKVPLQKIRLD
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgataagatcatccatattaagaatagggagacgttcccttagttctaaaaccgctgtg
ataacgactcctatattttatgtcaacgccaagccccatattggacactactactcaatg
actctcgcggacgtttacaacagatggctcaaattgagtggagaatcaacttttttcacg
acaggcaccgacgaacatggcctcaaggtccaaacagcagcagccgtcgctgggatggat
ccaaaaaccttttgtgacggactttcccaaaaattcagagagctcgcttctgtaggaaat
atacagtacgatagattcataagaaccacagatcccgatcatctggaggccgtgcaattt
ttctggaaaaccctggaggagaaaggacatatatacaagggcaaacattgcggatggtat
tctgtttccgacgagtgcttttatgcagaaacggagatcgaggaggtggacggaaagatg
gtcgccaaggagacaggcgcaactgttgtgtacgagacggaggaaaactactttttccgt
ttgagtgagcaccagcagcgactcattcagtttttgaaggacaacccgtcattcgtgcaa
cctcccctttattaccaaacgctgcttcgtgatctgaagtcacgtgaccttgaagacctg
agcgtctcgcgtcccagttcccgcgtgagttggggaatcagcgtgcccaatgatccgtct
cagaagatgtacgtctggtttgatgctctgatcaactacttgacctgcattgggtatcct
tctcagatacctcaggaaccatcgtttgtgcatctggttggaaaggagatcgtcaagttc
cactgtatccactggccaagctttctgatggcctgcgagcttccgctcccacgtggtgtt
tttgtccacggccattggctcatggatgggcgcaagatgagcaaaagccggggcaatgtt
gccgatccggtggagatttctgaaaagtatgagactgatgctctgcgtctctttatgatg
cgctattctgtgctggactccgactgcgattattctgagagcaagctgaatgccacgaga
aacgagttcattgacaagttctgcaacctgctgacgcggtcactgtccaaaaaattcagc
atttctcgggccctagcaaaggtcgagactcgcggacttgcgagcctgcttgacgaggct
ggagaggaattttcagctgatttgcggtctctctatgagcaggtggacgagctgccggct
actatcgatccgcatttaagaaaaatggaactgcacaaggcagtccttgccatatggcaa
ttattgcctcgcattaatggactatttgaccaatacgagccgtggagactaaaagggcct
gacaacgagctcatgcaggacctggtgattttcagtgcgcttgattcgctgcgctgtctg
ctgatcctgttgcaacctgttgttcctgactacaccaagatgctgcttgataaattacag
gtcgagccttcgaagcgaactttagacatggcgggcattgcaagagacaccagctatgcc
aagtctgctactttttcaaaaggagagaaggtcccgcttcaaaaaatcagattagactaa
DBGET
integrated database retrieval system
