KEGG   Ogataea parapolymorpha: HPODL_01136
Entry
HPODL_01136       CDS       T08137                                 
Name
(RefSeq) Flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
opa  Ogataea parapolymorpha
Pathway
opa03030  DNA replication
opa03410  Base excision repair
opa03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:opa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HPODL_01136
   03410 Base excision repair
    HPODL_01136
   03450 Non-homologous end-joining
    HPODL_01136
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:opa03032]
    HPODL_01136
   03400 DNA repair and recombination proteins [BR:opa03400]
    HPODL_01136
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:opa04147]
    HPODL_01136
DNA replication proteins [BR:opa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    HPODL_01136
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     HPODL_01136
DNA repair and recombination proteins [BR:opa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HPODL_01136
Exosome [BR:opa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   HPODL_01136
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc HHH_5
Other DBs
NCBI-GeneID: 25770601
NCBI-ProteinID: XP_013933110
UniProt: W1Q8A7
LinkDB
Position
VI:complement(<76615..>77739)
AA seq 374 aa
MGIKGLNALVAENAPRAIRSSEMKSLFGRKIAIDASMCLYQFLIAVRQQDGNQLTNEAGG
TTSHLMGFFYRTIRMVGNGIKPCYVFDGKPPVLKGGELEKRLKRREEAEQKALELKETGT
VEELQRFEKRQVKVTREQNEQAQHLLRLMGIPYVIAPCEAEAQCAELARKGKVYAAASED
MDTLCYQPPFFLRNVTAAESKKLKVDEFTTSAVLEGFGMDINTFVDLCILLGCDYCETIK
GIGPVTAFKLIKEHGSIEKIIEFIENDPKCKYKVPENWPYNEARELFLNPEVLNGDDIDL
KWTDPDLDGLIEFMVKENGFNEQRIRDGVEKLKKGLKGGVQGRLDGFFKVSVKAETKKRT
ETQDTKKNKRAKKK
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgggaatcaaagggctcaacgctcttgtggcggagaacgcgccacgcgccatcagatca
agcgagatgaagtctctgtttggacgcaagatcgcaattgacgcgtcaatgtgtctgtat
cagttcctcattgctgtcagacagcaagacggtaaccagttgacaaacgaagcaggaggc
accacgtcgcatctcatggggtttttctatagaaccattcgaatggtgggcaacggcatc
aagccgtgctatgtgtttgatggaaagcctcctgtcctcaaaggaggagagctggaaaaa
aggctcaagagaagagaagaggccgaacaaaaagctctggagctgaaagaaacgggcacg
gtggaggaattgcaaagatttgagaaaagacaggtcaaagtgacccgcgagcaaaacgaa
caggcacagcatctgctcaggctcatgggaataccgtacgtgatcgcgccgtgcgaggcc
gaagcacagtgtgcggaactggcccgtaagggaaaagtgtatgctgctgcctccgaggac
atggatacgttgtgttaccagccgccatttttcttgagaaacgtcactgcagcagaatcg
aagaaactcaaggtcgatgagtttaccactagcgctgtcctggaaggtttcgggatggac
atcaatacttttgttgatctttgtattcttcttggatgcgattattgtgagaccataaaa
ggcattggcccagtgacagccttcaaattgatcaaggagcatgggtccattgaaaagatc
atagagtttatcgagaatgatcccaaatgcaaatacaaggttcccgaaaactggccttat
aatgaagccagagaactgtttttaaatccagaggtactgaacggagacgacattgacttg
aagtggacggaccctgatttagatggcttgatcgagttcatggtgaaggaaaatgggttc
aacgaacaacgaatcagagacggtgtggaaaagctcaagaaggggctcaagggaggtgtg
caaggcagactggatggatttttcaaggtcagtgtgaaggcggaaacaaagaagcgtacg
gagacacaagacaccaagaagaataagcgtgcgaagaagaaatga

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