Ogataea parapolymorpha: HPODL_01137
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Entry
HPODL_01137 CDS
T08137
Name
(RefSeq) Nucleoporin
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
opa
Ogataea parapolymorpha
Pathway
opa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HPODL_01137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opa03019
]
HPODL_01137
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_01137
Messenger RNA biogenesis [BR:
opa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HPODL_01137
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HPODL_01137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nucleoporin_FG
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
25770602
NCBI-ProteinID:
XP_013933111
UniProt:
W1Q8B8
LinkDB
All DBs
Position
VI:77910..81020
Genome browser
AA seq
1036 aa
AA seq
DB search
MFGNSASTTSGFGGFGSNSAWNNNNSSPFGTNTVNNNTSSPFGSNTNTNTGGLFGAAANT
SSGLGTFGSNTNTNAPANGTSSNTGLFGTGSSFNSSSSPFGQSAFGNTASTGTTSTGLFG
ASNNTGSAFGSTATTSPFGQQSTAPRFGSTLGATNTQNRGTSVAPFKPLTEKDPTNGTQY
YETITAMPEYSKFSVEELRVQDYIDGRRYGNNAGSAGTGSFGTGTGFGSSTAGGFGTASN
TGGLFGQSNNTTSGGLFGQSNNNTGGNLFGANKPATGGLFGSSNNNTSAFGSNNNSAFGS
SAAPFGQTNNSPFGQQQQSATFGASSSSPFGQQNNNAGTLFGANNNQTSSPFGQQSTTPA
FGSNNQTGTGVFGNNNNQTSAFGSTGTNTGNLFGANTTANKPTFGGFGSSGNTSGGFGST
GNTSGNLFGNNNNNQQSGGLFGNNNSQSGGLFGQPNKPAGTGFGFGSTNNAQNGSLFGNN
ASANNNTSAPLFGNNTNQGGSLFGNKPAATSAGGLFGNNNTANTGTGGGFGFGANNNNNA
SSGALFGNKPASSGTGFGSTNAASGSLFGNKPAATTTTPSFGTTNNNTNSLFGNKPAGTT
SGGLFGNNNQSSTSGGLFGNKPATTGGLFGNNNQSSTSATSGGLFGNKPAGTTSGGLFGN
NNQQSSSFAFGQGQQQQQQQQQQQPLANLDPYGTNPLFSSMGANTNPIVQQPPVPQAIPV
KQVAKKKPMLTSAYKLNPKPLFSPNDLLVTKPGSIVAVSSPSTAGSNSSSKSATQTLIED
SKDSVNGSKSEKFLSPTTDDAILSSYIFAPSRNVTKLIIDKTKQEDEFEGLKATNLVTPR
RQITMKASMSSLTPKPYVSPSKTVLENGNSHEPPAEISSTPKSVSESTSTNEEWPEGYWI
SPSLEELQKMSATQLKSVPDFKVGRTGYGKIEFLKPVDLTSILLQKIPEIIVFDKQSCII
YPDLNTRPPVGEGFNIPATVSLEGCFPLSKDTKKPITDPHHAVVKKHIRRLQMIPNTEFV
GYDSISGTWQFKLEHV
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcaactcggcgtccaccaccagcgggtttggagggtttggttccaacagcgcc
tggaataacaacaattcctcaccgtttggaacaaacactgtaaacaacaatacctcatct
ccgtttgggtcgaacacaaacacaaacacgggaggcttgtttggggccgctgcaaatacg
tcctctgggctgggcacatttgggtccaacaccaataccaatgccccagccaatggcacc
tcctcgaacaccggcttgtttggaacaggatcatcgttcaacagctcatcttcgccgttt
ggccaatcggcctttggcaacacagcatccactggaaccacgtcaaccggtctttttggt
gcatcgaacaatactggctctgcttttgggtctacagccacgacgtctccgtttggccaa
cagtccactgcacctcggttcggatccacccttggagccactaacacccagaacagaggc
acgtctgtggctccattcaagccgctaaccgagaaggatccaacaaatggaacgcaatac
tatgagacaatcacagccatgcctgagtactccaagttttctgtcgaggagctcagagtt
caagattacatagatggcagacgctacggtaacaatgctgggtctgctggaacgggaagt
tttggcacaggaactggtttcggctccagtaccgctggtggatttggaaccgcatccaac
accggcggcctctttggccaatccaacaatactacctcaggcggtctatttggacagtcc
aacaataatactggcggaaacctctttggtgccaataaacctgccacaggcggccttttc
gggtcatccaataacaacacctctgcctttggctcgaacaacaattctgcatttggctcg
tccgctgctccattcgggcagacgaacaactcgccattcggccagcagcagcagtcggct
acatttggagcgtcctcgagttctccctttggacaacaaaacaacaatgctggcaccctt
tttggtgccaacaataatcagaccagctctccatttggtcaacagagcacaacacctgct
tttggctcgaataaccagaccggcactggcgtgtttggcaacaacaacaaccaaacaagt
gcttttggcagcacgggaactaacactggtaacctgtttggtgcaaacaccacggctaac
aaacccacttttggcggatttggctcgtctgggaacacatctggaggctttggctcgaca
ggtaatacctcgggtaatctatttggcaacaacaataataaccagcaatccggtggactg
tttggcaacaataacagccagtctggaggcctctttggccagcctaacaagcctgccggt
actggctttggttttggttcgactaataacgcacagaacggatcactgtttggaaacaac
gcttcggccaacaacaatacatcggcaccactgttcggcaataatactaatcagggtgga
tcactttttggtaacaaaccagcagccacttctgccggaggtctctttggaaacaacaac
acagccaacactggaactgggggtggctttggatttggcgcaaacaataacaacaatgca
tcgtcgggggctctgtttggcaataagcctgcttccagtggaactggatttggttcgaca
aacgccgcatctggttccttatttggtaataagccagcagccaccactacgactcctagt
ttcggcacaacgaataataataccaacagtttgtttggaaacaagccggcaggaacaact
tcgggtggtctttttggcaacaacaatcaatcctccacgtctggaggactttttggaaat
aagccagcgacgactgggggactcttcggaaacaataaccaatcatccacgtcggcaacc
tcaggaggactattcggcaataaacctgccggaacgacttctggcggcctctttggcaat
aacaaccagcaatcgagctcctttgcatttgggcaaggccaacaacagcagcaacagcag
caacagcaacagcctctggccaatctggacccatatggaacaaatcctttattttcctct
atgggagccaatacaaatcctattgtccaacaacctcctgttcctcaggctattccggtg
aaacaggtggccaagaaaaagccaatgctcacttcggcctacaaattgaacccaaaaccg
ttgttttcacctaacgatctcctggtaacgaaaccaggcagtattgtggcagtttcttct
ccatccaccgcgggctcgaatagctccagcaaatctgccactcagactttaatcgaagac
tccaaagactctgtcaacggctccaaatccgaaaaattcctctcgcctacaacggatgac
gccattttgtccagctacatttttgccccgtccagaaatgtcactaagctcatcattgac
aaaacgaagcaagaagacgagtttgaaggtctcaaagcaaccaatctagtcactccgcgt
cgccagatcacgatgaaggcctcgatgagcagcctcaccccaaaaccatacgtgtctcct
agcaagaccgtgctcgagaatggaaacagccacgagcctccagcagagatctcgagcact
cctaaatcggtgtccgaatcgacttcgaccaatgaggaatggccggagggctactggatc
tctccttcattggaagagctgcaaaaaatgtccgctacacagctcaaatctgtgccagat
ttcaaggtgggccgcaccggctacggaaaaatcgagttcctcaaacctgtggatctcact
tcaattctcctgcaaaaaatcccagaaattattgtgtttgacaagcagtcctgtattatc
tacccagatctcaataccagaccgccagttggtgaaggtttcaacatcccagcaacagtg
tctctcgaaggatgcttcccactgtccaaggacaccaaaaagccaatcacggacccacat
catgctgttgtgaagaaacatatcagacggttgcaaatgattccgaacacggagttcgtg
ggttacgattccatctccggtacctggcagttcaagcttgaacatgtctaa
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