Ogataea parapolymorpha: HPODL_01195
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Entry
HPODL_01195 CDS
T08137
Name
(RefSeq) Ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
opa
Ogataea parapolymorpha
Pathway
opa03010
Ribosome
opa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HPODL_01195
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
HPODL_01195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
opa03011
]
HPODL_01195
04121 Ubiquitin system [BR:
opa04121
]
HPODL_01195
Ribosome [BR:
opa03011
]
Ribosomal proteins
Eukaryotes
Large subunit
HPODL_01195
Archaea
HPODL_01195
Ubiquitin system [BR:
opa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
HPODL_01195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
DUF2604
Plexin_RBD
UBL_UBAC1
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
25770659
NCBI-ProteinID:
XP_013933170
UniProt:
W1Q8E8
LinkDB
All DBs
Position
VI:complement(176027..176413)
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLKALASKYNCEKAICRKCYARLPPRATNCRKRKCGHTNQ
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtcaagaccttgaccggaaagaccatcaccttggaggtcgagtcttcc
gacaccatcgataacgtcaagtccaagatccaagacaaggaaggaattcctcctgaccag
caaagattgatcttcgccggtaagcaactcgaggacggcagaaccctctccgactacaac
atccaaaaagagtccactttgcacttggttctgagactgagaggtggtatcattgagcca
tctcttaaggctttggcttctaaatacaactgtgagaaagctatttgcagaaagtgttac
gccagactcccaccaagagctaccaactgcagaaagagaaagtgtggtcacaccaaccag
ttgagaccaaagaagaagcttaaatag
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