Ogataea parapolymorpha: HPODL_01209
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Entry
HPODL_01209 CDS
T08137
Name
(RefSeq) Structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opa03400
]
HPODL_01209
DNA repair and recombination proteins [BR:
opa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
HPODL_01209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_29
BDI_1685-like_C
CENP-F_leu_zip
CCDC3_C
RNA_pol_Rpb5_C
ABC_tran
MCPsignal
AAA_27
AAA_25
AAA
AAA_21
Motif
Other DBs
NCBI-GeneID:
25770673
NCBI-ProteinID:
XP_013933184
UniProt:
W1Q9R1
LinkDB
All DBs
Position
VI:complement(<196995..>200273)
Genome browser
AA seq
1092 aa
AA seq
DB search
MGTRLASQNGFDLNSFTKKLKLPYKPDLEQYDTGAILRVKLRNFMSYSLTEFHFGPKMNL
IIGPNGTGKSTFVCAICIGLAGKLEYLGKSSMNVDHFIKSGQKEASIELELKAAEKFETV
IVEREFVRKGKTSWYINKKLSNELQIKKLLKDFNIQLDNLCQFLPQDRVARFASLKPEEL
LKELERLYENGELLEQHNKLIELYSLRQEKIKALADIEFQLTSLREKRVSLEERAQQYQE
YQLLEKELQRHETLRPYVELSTKKRAREELKKEAEEMSQRIKEFDKRILPMKEKLQQFHR
NLGSTETRINEYTSLKEKYTKELEQSLGAIKEVNSDIQKLNDQRLSLATDLETHRKKWQQ
LSEELDTMTQKLDSLEILSKEEIQELRDRRASIQDKLLEEQEPIDGLETEKRALMRINEQ
LENRIKTSESSLKSKDRLLVLDSHRFGNIIKAVKLLRENRKKMKLEYFEPPIISLTVTDA
KYGPALERCIRFQNQCAFTVRNNEDYKKLARFLYNENPDIGRNIGIRTLSENFSFQPRIH
REEIKKYNFDGYLVDFVEGPREVIQMVCENDRIHNIPVSHRDIDASIKDALSYKIRNENF
PMSEFIAGEAYYSFNKSSYGSKQVTANIRGFSSSRVSIFSGGLPDDKRLEIQHEIHECRH
KISTNNQTLGNIVQKIKEKQGMLKDLVKERDDLTAKISRQTRAEKDREKYVTHIETFKDR
MRVERKAINKIKHKETDGTASKLVTKIGKLEERKIEIYELIEPTISKICELDEKLLDAQI
FAIQENNKFSTIESLNESILTTREEMLEKRNELRSAYVKAKEEYTQALKDYKALLETFSD
EDRLELEKLVAGLQESDALTEEGLNAEISRIKSQMRLRRNGAGADSLKRLEEVEKEIQQY
EQKLPELDVDVGILDRQIQDLVSVWRPKLDSVIRTIAKDFSENMKAVASAGDVQLDSESE
NFSEWKLKILVSFRDSHALMQLNAAQQSGGEKSATTAVFLNSLQGLTNTPFRVVDEINQG
MDSKNERLIHELIVRKSCSARGSQYFLITPKLLTNLYYGTGMRVHCILAGRWCPDYEDKV
EFLEMGVTDKYF
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgggcactcgtctagcatcgcagaatggctttgatctgaactccttcaccaagaagttg
aagctaccctataaacctgatttggaacagtatgataccggtgctatactgcgggtgaag
ctccgcaacttcatgtcgtactcgctcacagagtttcactttggccccaaaatgaacctg
attataggacctaatggaactggaaagtccactttcgtctgtgctatatgtattggactt
gcaggaaagcttgaatatttaggtaagagttctatgaatgtggatcatttcatcaaatcg
ggacaaaaagaggccagtattgagctagaacttaaggctgctgagaagtttgaaacagtc
atagttgaaagagagtttgtgagaaaaggaaaaacaagctggtacattaacaagaagctt
tcaaacgagcttcaaatcaaaaaattgctgaaggacttcaatatccaactcgataatctg
tgtcaatttctgcctcaagatagagtggcaagatttgcatcactcaaacccgaagagcta
ctcaaggagcttgaaagactgtacgaaaatggcgagcttctggaacagcataacaagtta
attgagctttactctttacgtcaagaaaaaataaaagctctggccgacatagaatttcag
cttacgtccttgcgagaaaagcgtgtatcattggaggaacgtgcacagcaataccaagag
tatcagctattggagaaggagcttcaaagacatgaaacattacgcccttatgttgagctg
agtaccaaaaaacgtgctcgtgaagagttgaagaaggaggcagaagaaatgagccagaga
atcaaagaatttgacaaaagaatcctcccaatgaaggagaaattacaacagtttcaccga
aatttgggcagcactgagacgcggataaacgaatacacttccttaaaagagaaatatacc
aaagagcttgaacagagtttgggagctatcaaagaagttaactccgatatacaaaaattg
aatgatcagagactctcgttggcaacggatcttgaaacacaccgcaagaaatggcagcaa
ttatcggaagagcttgatactatgacgcagaaattggattcgctcgagattctcagtaag
gaagaaatacaggagcttagagatcgcagagcatccattcaagataaacttttggaagaa
caggaaccaatcgatggtctggagacagagaaaagagcattgatgagaataaatgaacag
cttgagaaccgtatcaagacgagtgagagcagtctaaagtccaaggaccgactacttgtt
ttagactcacacagatttggaaacatcatcaaggccgttaagctcttgagagaaaacaga
aagaaaatgaagctggaatattttgagcccccgattatctcgttgactgtcaccgatgcg
aagtacgggcctgctttggaacggtgtattcgcttccaaaatcaatgtgccttcactgtg
cgcaacaatgaggactataagaagctggcacgctttctatacaacgaaaatcctgacatc
ggacgcaatattggtatccgtaccttgagcgagaacttcagttttcagccacgcatccac
agggaagagatcaagaaatataactttgatggatacttggtggactttgttgaaggccca
cgggaggtgattcaaatggtatgcgagaatgacagaattcataatatccccgtttctcat
cgcgatatcgatgcgtccatcaaagatgctctctcctataaaatacgaaacgagaacttt
cctatgagcgagttcattgctggtgaagcctactattcgttcaataagtcaagctatggg
tctaagcaggtcactgcaaacatcaggggcttctcctcaagccgagtctccattttctca
ggtggtttaccagatgataaacgattggaaatacaacatgaaattcacgaatgcaggcac
aaaatatcaacgaacaatcaaacattgggaaatattgtacaaaagatcaaggaaaaacag
ggaatgcttaaagatttggtgaaggaacgagacgatttgacggcaaaaattagtcgccag
actagagcagaaaaggatagagaaaaatacgtcactcacattgaaacattcaaggataga
atgagggtcgagaggaaggcaatcaataaaataaagcacaaggaaacggacggaactgct
tcaaagctggttaccaaaataggcaaattggaagagaggaagattgaaatatatgagctg
attgagccaacgatatcaaagatatgcgaattggacgaaaaactcctagatgctcagata
tttgcgatccaggaaaacaacaaattcagcaccatcgagtcactgaatgaatcgattttg
acaacacgtgaagaaatgttagagaagagaaatgagctcagaagcgcatatgtcaaagcc
aaggaagaatatactcaagctctgaaagactacaaagccttgctcgagaccttttctgat
gaggatcgtttagagctagaaaaactggttgcagggcttcaagaaagcgatgctttgacg
gaggaaggtctcaacgctgagatcagtaggatcaaatcacagatgcgtttacgccgaaac
ggtgcgggagcagactctttaaaacgcctggaagaggtggaaaaggaaattcagcaatac
gagcagaaattgcctgaattagatgttgatgttggtattcttgatcgacaaatacaagat
cttgtctcggtctggagaccaaaactcgactcagtgattcgaactatagcaaaagacttt
agtgagaatatgaaggccgtggccagtgccggcgacgtgcagcttgatagtgagtcagag
aacttttcggagtggaaactgaaaatccttgttagcttccgtgatagccatgcgttaatg
caattgaatgcggcacaacaatctggaggagagaagtctgccacaacggctgtattcctg
aactctttacagggcctcacgaatacgccatttcgtgttgttgacgaaatcaatcaaggt
atggattcgaaaaatgagaggcttatccacgagttgattgttcgcaaatcgtgctccgca
cgtggctcacaatactttttgatcactcctaaactccttacgaatctatactatggaaca
ggaatgcgcgtacactgcattcttgctggaagatggtgtcctgactatgaggataaggtg
gaatttttggagatgggggtgacggataaatatttttga
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