KEGG   Ogataea parapolymorpha: HPODL_01259
Entry
HPODL_01259       CDS       T08137                                 
Name
(RefSeq) putative transcription initiation factor TFIID subunit
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
opa  Ogataea parapolymorpha
Pathway
opa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:opa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HPODL_01259
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:opa03021]
    HPODL_01259
   03036 Chromosome and associated proteins [BR:opa03036]
    HPODL_01259
Transcription machinery [BR:opa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     HPODL_01259
   Coactivators
    SAGA/TFTC/STAGA complex
     HPODL_01259
Chromosome and associated proteins [BR:opa03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     HPODL_01259
    STAGA complex
     HPODL_01259
    TFTC complex
     HPODL_01259
    SAGA complex
     HPODL_01259
    SLIK complex
     HPODL_01259
SSDB
Motif
Pfam: WD40_Prp19 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 TFIID_NTD2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_DCAF4 NBCH_WD40 Beta-prop_SPT8 LisH PROPPIN Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N eIF2A WD40_RFWD3 Beta-prop_WDR19_1st Tricorn_2nd VPS8_N LisH_PAC1 DUF7165 Beta-prop_HPS5 Beta-prop_RIC1_2nd GFRP Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 25770722
NCBI-ProteinID: XP_013933238
UniProt: W1Q9X6
LinkDB
Position
VI:complement(<274991..>277264)
AA seq 757 aa
MTGPIKEENDPQNLTRAAQGQEWSDPRAAQQTRAPGSANVAQGQQQFSQADLNRIVLEYL
NKKGYHQTEATLRNEATKIPGAPTIPVSPATTNFQKPETIVSNRSNIHFQQQQYLHQQNA
SRQRQFDEDPQMFGRAYLLYRSWCENSLEMYKYELEKFLYPIFVQSYLTLIQRGDVNDAR
SFFEKFHSDHLLSHSYEIRSLAGISLPDHLEENEIARLFKTEKYHVNVSKVSMNLILSFL
NENEAIGGGIIVRIINNTMSITTQVEVTTQEEEGNGEHTEGIAAIYQLLNDESHRLKKDT
ESSEVFNSKAVKLGKFPDDPEFVKELEAELQQKDEAQKDQNPEKTLMEEYEENFKVDPAG
EDTPARESLPLPQKTAFDLKREITKIQDSRAKVKLNAVQASLPSTCMYTFHNTNNDMTCV
EFNDDSTIVAGGFQDSFIKLWSIDGSPLKSVIRNDPYDQSVDGCRRLIGHSGAVYGLSFS
PDNHYLLSSSEDKTVRLWSMDTYTSLVSYKGHNSPVWDVKFSPLGHYFATASHDQTARLW
SCDHIYPLRIFAGHLNDVDVVEFHPNSTYLFTGSSDKTVRMWDIARGESVRIFIGHNMPV
NALAVSPDGRWLATAGEDSVINMFDIASGRKLKSMRGHGRCSIYSLAFSKDGSVLVSSGS
DNSVRVWDVKKGTMESNNPQPEKFTLESVLAAKNGDGNQPADTQDQRYQRRQEEMRKRKE
FAATQDHMAVYFTRKTPVYKVHFTRRNLCLAAGVFNG
NT seq 2274 nt   +upstreamnt  +downstreamnt
atgacgggacctataaaagaggaaaacgacccgcaaaatttgactagggcagctcagggt
caggaatggagcgatcctcgtgcagcacagcaaacacgagccccaggatctgccaatgtt
gctcagggccaacagcaattctctcaagctgacttgaaccgaattgtgttagagtatctg
aacaaaaagggctaccatcaaacagaggcaactctcagaaacgaagccaccaaaattcca
ggtgctccgacaattcctgtgagccccgcaactacaaacttccagaagccagaaaccatt
gtctcgaaccggtcaaatatccactttcaacaacaacaatacctccaccaacagaacgcg
tcgaggcaaagacaatttgatgaggaccctcaaatgtttggtagagcttacttgctttat
cgctcatggtgcgagaactcgcttgaaatgtataagtacgagctggagaaattcctctat
ccgatttttgtccagagctatttgacgctcattcaacgtggtgacgtcaacgatgccaga
agcttctttgaaaagtttcatagcgatcacctactgtctcatagttatgagatacggtcg
ctggcaggaatttctttaccggaccatttggaggaaaatgagattgcaaggctgttcaag
actgaaaagtaccatgtgaacgtttccaaggtctccatgaacctcattttgagtttcctt
aatgaaaatgaggcaatcggaggtgggatcattgtgagaattatcaataacaccatgtct
atcaccactcaggtcgaggtgactactcaagaagaggaagggaatggcgagcacacagaa
ggaattgctgcaatatatcagttgttgaatgacgagtctcacagactcaagaaagataca
gaatcatctgaggttttcaacagcaaggctgtcaagctgggaaagttcccagatgatccg
gagtttgtcaaggagttggaggcagagcttcagcaaaaggacgaagcgcaaaaagatcaa
aatccagagaaaaccctgatggaggaatacgaagaaaatttcaaggtggatcctgctggc
gaggatacccctgctcgagaatcgcttcctctgccccaaaagacagctttcgaccttaaa
cgtgaaatcactaaaattcaagattcccgggctaaagtcaaacttaatgcggtccaagcc
tccttgccaagcacatgcatgtacacatttcacaatacgaataacgatatgacttgcgtt
gagttcaacgacgattcgactattgtggcaggaggtttccaggactcatttatcaaacta
tggagtattgatggatctccactgaaatccgttataagaaatgacccctatgaccagtct
gtcgatggatgccgtcgcttaataggccactcaggtgcggtttacggattaagcttcagt
cctgataaccactatcttctttcatcttcggaagataaaactgtcagattatggtcaatg
gatacttacacttcgcttgtgtcatacaaaggccacaactcgcctgtgtgggacgtgaag
ttttccccattggggcactattttgcaactgcatctcatgaccaaacggccagattatgg
tcatgtgatcacatatatcctttgcgaatttttgcaggccatctgaatgacgtcgacgtg
gtagagttccatccaaactccacgtatctgttcacgggttctagcgacaaaacggttcgg
atgtgggacatcgccagaggagagtcagtccgaattttcatcggtcacaacatgcccgtt
aacgctttggcagtttctcctgacggcagatggctggccacggcaggggaagattcagtg
atcaacatgtttgacattgcctctgggcgtaagctgaagtcgatgcgtggacacggacga
tgctccatctattcattagctttcagcaaagacggatctgtattggtcagttccggttca
gataactctgttcgcgtttgggacgtgaagaaagggacaatggaaagtaacaatccacaa
ccagagaagttcacattggaatctgttttggcagctaaaaatggcgatggaaaccaacct
gcagatactcaagatcaacgttatcaaagacgtcaagaagagatgcgcaaaagaaaagaa
tttgctgctacgcaagatcacatggcagtgtatttcaccaggaagactcctgtttacaag
gtgcactttactcggcgaaacttgtgtttggcagcgggtgtttttaatggttag

DBGET integrated database retrieval system