Ogataea parapolymorpha: HPODL_01303
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Entry
HPODL_01303 CDS
T08137
Name
(RefSeq) Structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
opa
Ogataea parapolymorpha
Pathway
opa04111
Cell cycle - yeast
opa04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
HPODL_01303
04113 Meiosis - yeast
HPODL_01303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_01303
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
opa00535
]
HPODL_01303
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
HPODL_01303
Meiosis-specific proteins
Cohesin complex and associated proteins
HPODL_01303
Proteoglycans [BR:
opa00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
HPODL_01303
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
HH_AprE
AAA_29
FtsK_SpoIIIE
DUF1854
ABC_tran
Motif
Other DBs
NCBI-GeneID:
25770766
NCBI-ProteinID:
XP_013933284
UniProt:
W1Q9X7
LinkDB
All DBs
Position
VI:<358641..>362180
Genome browser
AA seq
1179 aa
AA seq
DB search
MTIIDSFSPKHNVVVGRNGSGKSNFFAAIRFVLSDAYTNMTREERQSLIHEGSGTVMSAY
VEIVFDNTDRRFPIDKDEVVIRRTIGMKKDDYSLDSKLATKSDITNLLESAGFSKSNPYY
IVPQGRITSLTNAKDSERLQLLKEVAGARVFETKLKDSLKEMTNTNKKREQIEEMLRYIE
GRLEDLDLEKNDLKEFEKLNNKKKSLEYNLYDRELTNLNDQIESLESDYAAAIQDTSSLV
EKLAEREKQAQSIEAQLAELTADLKLVDVDISENDAEIRDVLTSIGDTSARLKEAEADTG
FSGADIASQLEELNALISQKEVELGKCQPALKQALTKERAIKGKLDEMKQQQRSLLSKKG
RFSQFKSKLERDEWLKSEIINLTKSLESKKGDLAVYLKNKEEIESLAGNLASELSIAKSA
DSLDAEMDSLDKELAQLKLEYNQLIDDRKQLWREESKLNSVIQTYETEKARAQQGVSETM
DRSMALGLEGVQRIAKDLGLNGVYGTLGELINVSEKYKTAVEVIGGNSLFHIVVDTDRTA
TLIMEELIRQKAGRVTFMPLNRLNPKTPSYPDTSECVPLIKKIAFDEYLEPAVKQVFGKT
VVCINLEKGAEISQAYKLNTITLDGDRCDRKGVLTGGFRDQTRSRVDCLKNLTKWKSEIF
SARQKLEQVKKQIADKDARVTNASEELANKRRELDAMFTKKESYLSAKSKLSNEKSRYDQ
ELGSLEGRIESLQTSIKLSEQQISEYQNELESEFKESNLSDTELQQLKELEENISIAEQE
YTQVSEQLNELELRASSLISELNGSLYPRLRQLSLRTSKSQENDDIKVKELESKLQRLEE
TKEKLESSNSELLSKSKELKKQLKSLEDQLQKLNESQRNLLRRLENYGKSSEKSLSRKVL
LGNRRDEISRKIRDLGVLPEEAFTAYKDISSGEVLNLLNEVTESLKQYSHVNKKALEQFL
NFAKQRDSLVARKNELDDAKESIEDLISVLERRKDDAIIRTFKEVSIGFTEVFEKLVPAG
TGKLIIQKRSEKVGKGKRGIEQDSDDEEDAELVDQYVGISISVSFNSREDEQQRIEQLSG
GQKSLCAIALILAIQKCDPAPFYLFDEIDANLDAQYRTSVSQIIHELSRNAQFICTTFRP
EMLKVCDKYFGVMFNNKVSTVSEIDQADALGFVEGQQRR
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcatagactcgttttctcccaagcacaatgtagtggttgggcgtaacgggtca
ggaaagtcgaatttcttcgccgccatcagatttgttctatcggacgcatataccaatatg
acaagagaggagcgccaatcactgattcacgaaggttccggtactgttatgtccgcttat
gtggagattgtttttgataacacagatcgcaggtttcctatcgacaaggacgaggtcgtg
atcagaagaacaattggtatgaagaaagatgattactcgctagactccaaacttgctacc
aagtctgatattacgaacctcctcgaaagtgctggtttttcaaaatctaatccatattat
atcgttccccaaggtcggatcacttctttaactaatgccaaagactctgaaaggttgcag
cttctgaaagaagttgctggagctcgcgtttttgaaacgaaactgaaagactcgctcaaa
gagatgacaaacaccaataagaaaagagagcaaattgaggagatgttgaggtacattgag
ggtcgtttggaagatctcgacctggaaaaaaatgatctcaaggaatttgagaagctcaat
aataagaaaaaatctctcgagtataatctttatgatagagagttgacgaatctaaatgac
cagattgaatctctggagtcagattatgcagctgctattcaggacacctcttccttggtt
gaaaaactagctgagagggagaaacaggcacaaagcattgaggctcaactcgcagagctt
acggcagatttgaaacttgttgatgttgacatttctgagaatgatgccgaaattagagac
gtgctaaccagtataggagacacgagtgctcgattgaaagaagcagaggcagacactggt
ttttcaggagctgatattgcttctcagctggaggaactgaatgctctaatatctcagaag
gaagtagagcttggcaagtgtcagcctgctcttaaacaggctttgacgaaagagcgcgct
atcaaaggcaagctggatgagatgaagcaacagcagcgctcccttctttccaaaaagggc
cgtttttcacagtttaagagcaagttggaacgagatgaatggctcaaatcagaaatcatt
aatttgacaaaatcccttgaatccaaaaagggggaccttgctgtctacttgaaaaataag
gaagaaatagagtccttggcggggaaccttgcctctgagttgagcattgctaaaagtgct
gactccctagatgctgaaatggattctcttgacaaagagctggcgcaattgaagctcgaa
tacaatcaactcattgacgacaggaaacaactttggagagaagaaagcaagcttaatagt
gttatccagacatacgaaactgaaaaagccagagcgcagcaaggagtcagtgaaacgatg
gatcgttcaatggctttgggactcgaaggggtccaacggatagctaaagatcttggtttg
aacggggtgtatgggaccttgggagaactcataaatgtcagcgaaaaatacaaaactgcg
gtcgaagtcattggtggaaattctttgtttcatattgttgttgataccgatagaactgcg
acgcttatcatggaggagctgattagacaaaaagcagggcgagtgactttcatgcctctc
aataggttgaatcctaaaaccccgtcttatccagatacatcagaatgcgttccgcttatt
aagaagattgcatttgacgaatacttggagcctgctgtgaagcaagttttcggcaagaca
gttgtctgcatcaatctggagaaaggcgctgaaatctcacaggcttacaaactcaacacc
attactttagacggcgatagatgtgaccgtaagggtgtgctcacaggaggattccgagac
caaactcgttcaagggtcgactgtcttaagaacttgaccaaatggaaatctgagattttc
agtgcccgacagaagcttgaacaagtcaaaaagcagattgctgacaaagatgctcgtgtc
accaacgcaagcgaagaattagcaaataagcgcagagaattggatgccatgttcacaaaa
aaggagtcttacttgtccgccaaatcaaaactttcaaatgaaaaaagcagatatgaccag
gagcttggttctctggaaggccgcattgagtcactacaaacctcgataaagctttcggag
caacagatcagtgaataccagaatgaactagaatctgagtttaaagaatccaatctgagc
gacaccgagttgcagcagctgaaagagctcgaagaaaatatttcgattgctgagcaagaa
tacactcaggtcagtgaacagctcaacgagctggagttgcgggcctcgtcgctcatatcc
gagttaaatggtagtttataccctcggttgaggcagttgagtctgcggacgtccaagtct
caggaaaatgatgacatcaaggtcaaagaacttgaaagcaaactgcagagattggaggaa
accaaagagaagttggagtcgtcgaattctgagttgctcagcaagtcgaaggaattgaag
aaacagcttaagagcctggaggaccagcttcaaaaactcaatgagtcacaaaggaatctc
ttgcggcgactagaaaactatggcaagagctctgaaaaatcattgagcagaaaggtgttg
ctgggtaacaggcgcgacgagattagccggaaaatcagggatttgggtgtcttgccagaa
gaggcgtttactgcttacaaagatataagctcaggtgaagttttgaatttattgaatgag
gtcactgagagtttgaagcagtacagtcatgtcaataaaaaggccctagaacagttcctt
aattttgccaaacagcgtgactcgctggttgctcggaaaaatgagcttgatgatgctaaa
gagtccattgaagaccttatttcggttcttgagcgcagaaaggatgatgccatcatcaga
acatttaaagaagtgagcatcggcttcaccgaggtgtttgagaagctagttccagcagga
accggtaagctgatcatccagaaaaggagtgaaaaggttggtaaaggcaagaggggtatc
gaacaagactctgatgatgaagaggacgctgaattggtggatcaatacgtcggtatttcg
atttcagtctctttcaattcaagggaggatgaacagcaaagaatcgaacagctttctggc
ggacagaaatcgctctgtgcaattgctctcatcctggcaattcagaaatgtgacccggct
ccattttacctgtttgatgagattgatgcaaacttggatgcccaatacagaacttctgtc
tcgcagatcattcacgagctttcccgtaacgcacaattcatatgcactacgttccgtcca
gaaatgctcaaagtttgtgacaagtactttggagtgatgttcaacaacaaagtgagtaca
gttagtgaaatcgatcaggccgacgcgcttggatttgttgagggtcaacaacgtcgctag
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