Ogataea parapolymorpha: HPODL_01477
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Entry
HPODL_01477 CDS
T08137
Name
(RefSeq) Small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
opa
Ogataea parapolymorpha
Pathway
opa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HPODL_01477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opa03019
]
HPODL_01477
03041 Spliceosome [BR:
opa03041
]
HPODL_01477
03032 DNA replication proteins [BR:
opa03032
]
HPODL_01477
Messenger RNA biogenesis [BR:
opa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
HPODL_01477
Spliceosome [BR:
opa03041
]
Complex A
U1 snRNP components
Sm proteins
HPODL_01477
U2 snRNP components
HPODL_01477
Complex B
U1 snRNP components
HPODL_01477
U4/U6.U5 tri-snRNP components
HPODL_01477
Complex C
U2 snRNP components
HPODL_01477
DNA replication proteins [BR:
opa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
HPODL_01477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
25770938
NCBI-ProteinID:
XP_013933463
UniProt:
W1QAK1
LinkDB
All DBs
Position
VI:complement(652632..652889)
Genome browser
AA seq
85 aa
AA seq
DB search
MSGRRQKVMVPPINQLFKYLQQQSRVTVWLYEQTGVRIAGVIRGFDEFMNIVLDEAVEVD
AATKKERKLGRILLKGDNITLISGE
NT seq
258 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccgcagacagaaagtgatggttccgcccatcaaccagctcttcaagtatctc
cagcagcagtcgcgtgtgacggtgtggctgtacgagcagactggcgtgcgaattgctggc
gtgattcgcggattcgatgagttcatgaacatcgtgctggacgaggcggtcgaggtcgac
gcggctacaaagaaagagcgcaaattgggcagaattctactgaagggcgacaacatcacg
ctgattagcggcgaatag
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