Ogataea parapolymorpha: HPODL_01499
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Entry
HPODL_01499 CDS
T08137
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit 2
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
opa
Ogataea parapolymorpha
Pathway
opa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HPODL_01499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opa03400
]
HPODL_01499
DNA repair and recombination proteins [BR:
opa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
HPODL_01499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-GeneID:
25770960
NCBI-ProteinID:
XP_013933485
UniProt:
W1Q989
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All DBs
Position
VI:680223..682298
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AA seq
691 aa
AA seq
DB search
MEKEITFFVFDQSPSMASKLDACLDLALGLILRSAMRGKKTDLFGIAKLHDKHTDNPMDT
ISPGNWNNCVLEGPEHYDWDRMARLKDVVRINADPVDELEVDLPRSLAIVLQKIMEMNPK
KTKKEKYTIYVMSDMQNPTNWDQLTELVSTAAIGYNALITIVSCMAETEAESNVVSANLD
QIDELMARLQKSNGRASLSYFCGLEQFRDLLRWEKEPVRIYRAARLFTGEVRMGCDLYSL
DLKNCASALRLDKKELKLYAGDYDPVSDALTVKFQADAYPLTKSQKMQFTHEMGIHQDPD
SDTRHLVELKHTTDKYVTFEPDSQSTEPRFLDATEVQEAYRYGSSTVPVTSSLKQLLNIN
TYAGLDILQFVRRKSIPPWYFHGEAEILLNNQNSSVRDQFGFNMLAQALLEHDLVAIVRY
VKRNAGTARLAAMSPCIVLTDATKYKHELQTGDKRKLEEMDGEPDHYGFSLVALPFAEDE
RLSTFAKLSGVAESNGGDNLGSENFPSEQMLQEMGQLVDLMDLDGPGSLKKPEDHRFVEL
NDPESFPIPTEEMLGDDPSMFRVSESTRRLLRQNSPKLHYISHLMREVYLRQLKAAQKIG
DRYETLFETAEKMSEEYSRFVEELFGRKCEFRSPVELGEQTAEIDAVCSRLEQLLDIKPV
PEVSATSKPANDQRTQPTMSIDALLNSVLPG
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagaaatcactttctttgtcttcgaccagtcgccgagcatggcatccaaattg
gacgcctgcttagacttggcacttgggctgattctacgcagcgccatgcgtggcaagaag
accgatctctttggcatcgccaagctccatgacaaacacacagataaccctatggacacg
atcagccccggaaactggaacaactgtgttcttgagggcccggagcactacgactgggac
cgcatggcgcgattgaaggacgttgtcagaatcaatgcagaccctgtggacgagctggag
gtagacttgccgcggtcactggccatcgttctgcagaagatcatggagatgaacccgaaa
aagacaaaaaaagagaagtacaccatctatgtcatgtcagatatgcaaaatccaaccaat
tgggatcagctcactgagctcgtgagcaccgctgccatcggctacaacgccctaattacg
atagtaagctgcatggccgaaacagaggccgagagcaacgtggtgtctgccaatcttgac
cagatcgacgaactgatggctcggctgcagaagagcaacggtcgtgcctcgctgtcatat
ttctgcggcctggagcagttccgcgacctgctacgctgggaaaaggagcctgtgcgaata
taccgtgctgcgcgattgtttacgggcgaggtcaggatggggtgcgacttgtacagtctg
gacctgaagaactgtgcgtcagcgctccgattggacaagaaagagctgaaattgtacgct
ggtgactacgatccggtctccgatgctctgaccgtcaaattccaggctgacgcttatccg
ctaacaaagagccagaaaatgcagtttactcacgaaatgggcatccaccaagaccccgac
tcggacactcgccatctggtcgagctcaaacataccacggacaagtacgttaccttcgaa
ccggatagccagtcgacagagccgcggtttctggacgcgacagaggtccaagaggcatat
cgctacggctcgtcgacggtgccggtcacttcgtcgctgaagcagctgctgaatatcaac
acgtatgccgggctcgacattttacaatttgtgcgtcgcaaaagtattccgccgtggtat
ttccacggagaagccgaaattctgctaaataaccagaacagctcagtgcgcgaccagttc
gggttcaacatgcttgcacaggcgctgctggagcacgatttggtggcgatagtgcgctac
gtcaagcggaacgcaggtaccgcgcgtttggcagcaatgagcccgtgcatcgtgctgacg
gacgctacaaagtacaagcacgagctgcagacgggcgacaagcgcaagctggaggagatg
gacggtgagcccgaccattacgggttttccctggtcgcgcttccgtttgccgaggatgag
cggttgtcgacgtttgcgaagctgagcggggtggctgaaagcaatggcggggataatttg
ggcagcgagaattttccaagtgagcagatgttgcaggagatgggccagctggtggatctg
atggatttggacggaccgggcagcttgaaaaaaccggaagatcaccggtttgtggaactg
aacgacccagaatcgttccctattccgacagaggaaatgcttggtgatgacccatcgatg
ttccgtgtgagcgagtccacgcgtcggctgttgagacagaactcgccaaaactgcactat
atttcgcacctgatgcgggaggtgtatttgcgacagctaaaagcagcacaaaaaatcggc
gatcgctacgagacactttttgagacggccgagaagatgtctgaagagtacagccgattt
gtggaggagctgtttggaaggaagtgcgagttccggtcgccggtagagctaggggagcag
acggccgaaatcgacgcagtttgtagtcgtctggagcagctgcttgatatcaagccggtt
ccagaggtttcggcaacttccaaaccggccaacgaccagcggacgcagcctacgatgtcg
atcgatgcgctgcttaacagcgtgctaccaggatga
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