Ogataea parapolymorpha: HPODL_01536
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Entry
HPODL_01536 CDS
T08137
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
opa
Ogataea parapolymorpha
Pathway
opa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HPODL_01536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opa03041
]
HPODL_01536
Spliceosome [BR:
opa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
HPODL_01536
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
25770997
NCBI-ProteinID:
XP_013933522
UniProt:
W1QCJ5
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Position
VI:738676..740079
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AA seq
467 aa
AA seq
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MGLADSLLAGYSSEEEGQESDIELQDADDQQPSFQQLISVPDLSLITDIRKYSHILPRVN
EFVEKLRYYEKQDSKTEDSLLQNANDLLDDLNEEIGKIYSFITVHYKPVWPELDDLLRNP
YNYARTVRIILGNPSKLIDAPELFEQYLRKDEILGLTVSASVLRQSSHSHHLDQHHLKLI
SDACDLLLELEAARTEIKNHVSRRAKSIAPNVTALVGPTVAAQFLSVYGLEGLCKVPSCN
IPSMGANRSSFMKGTAGTRNKGYLYYCDLVQSVSEDLRVKAVRMVAGKLILAARVDYSNA
RKSVSDDSFGLQTRQQLSEHLDKLASPPDAQPIKPLPKPVDQKSKKRAGRRFRKQKEKME
MSELEKAQNRMAFGEQEETKYDAFGEEVGMGMIGKLSARAIASRSRPQLSKAAASKLEKF
SGNKSVATSKVAQLLDDEKIARKRQLELPEDTGHGRTKLQKTLPGAT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgggtcttgctgatagtctcctggcgggctattcaagtgaggaagagggccaagagtct
gatattgagctccaggatgctgacgatcagcagccttcttttcagcagctgatatcggtt
ccagatctgagtcttatcacagatataaggaaatactctcatatattaccaagagttaac
gagtttgtggaaaagttgcgatactacgagaaacaagactcaaaaacggaggacagcctc
ctacagaatgccaacgatctattggacgatctgaacgaagagatcggcaaaatatattcc
ttcatcaccgtccattacaagccagtttggccagaactcgatgatttactacgaaatccg
tacaattatgctcgcacagtgaggattattttaggaaacccgtcgaaacttattgatgct
ccagaactctttgagcaatatctccgtaaagatgagattctcggactcacggtctctgca
tctgttctaagacaatctagccatagccatcatctcgaccagcaccatttgaaactcata
tcagacgcctgcgaccttcttctcgaactggaggctgccagaacagaaatcaaaaaccac
gtttctcgcagagccaaaagtatagctccaaatgtgactgctctggtgggccccacagtg
gccgcgcaatttctatcagtgtacggactggagggcctttgcaaagttccatcatgtaat
ataccgtctatgggagccaacagatcctcattcatgaagggtacagcaggtacgcgaaat
aagggatacctgtattactgcgaccttgtacagtcggtctcggaggatctccgagtgaag
gctgtgcgcatggttgcgggaaagctaattctagccgctagggttgactactcaaatgcg
cgaaaatccgtttccgacgactcgtttggactgcagacgagacaacaactcagtgagcat
ctggacaagctggctagtccaccagatgcgcagccaattaaaccactacccaagccagtg
gatcaaaagtctaagaagcgggctggtcgtaggttccgcaaacagaaagaaaagatggaa
atgtctgagctggaaaaagcacagaataggatggcatttggtgaacaggaagaaacgaaa
tacgacgcttttggtgaggaggtcggaatgggtatgattggaaagctttcggcgcgggct
attgccagtagaagccggcctcagctgtccaaagcagctgcttccaaactcgagaagttt
tcggggaacaagtcggtagctacgagcaaagttgcacagctacttgacgacgaaaaaata
gcccgcaagcgacaattggagttgccagaagatactggccacggtaggaccaagctacag
aaaacgcttcccggagccacctga
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