Ogataea parapolymorpha: HPODL_01585
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Entry
HPODL_01585 CDS
T08137
Name
(RefSeq) DNA repair protein RAD4
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
opa
Ogataea parapolymorpha
Pathway
opa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPODL_01585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opa03400
]
HPODL_01585
DNA repair and recombination proteins [BR:
opa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
HPODL_01585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
25771045
NCBI-ProteinID:
XP_013933572
UniProt:
W1QCN4
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Position
VI:complement(807641..810073)
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AA seq
810 aa
AA seq
DB search
MLAEALRESSGSDTGSEGSGRPLKRRGGRRSRSDERESGNDKRAKIETANDSVIEVSDGS
SVSPQPPQTEPVGTEVISVDSEEDEYSEFDEDFEDVDLSGPAPDLNRADLSEEITVSVSR
PTKQTRKQNLVSADERMFRKTLHMLYLFAMVAHGVVRNTWCSSPEVLRVLRGQVPGKLLA
EVDEFHEQQQRADVTSAAKSRRLLDLLRHLMQYWYRSWTLEARHRGLYKKTWEEIAKLWE
QPAVQGENVTKTRFIRRMEQRRGSRDLAAQGFVALLRALDINCRLVFSLQPPDFTNLAVL
ASSTPSNGPSKETSPAPKSSPRRRKTASQHERLLSALRVNRPVYTNFRPETQDDVQYPVF
WCEVWDSASKRFTSIDPIVQRYIENVGTRSKFEWPNNTTYVLAYDRLGGVRDVTRRYSVH
FNAKTRKKRITRDPRGQDWYDKLLRGANSRRRLASNKIDQYEQVEFEERSLKEGMPNSIQ
DFVNHPVYVLEEQLKANEVLKPKISCGTIRKKTKAGKAGELVPVYRRSNVVTVRSAKAWF
LRGRVLKIGEQPLKVREQRKQRPDDDDDDVRLYGEHQTEKYVPPPIVDGKIPRNSYGNID
VYQPWMLPEGTVHIPEKQAEKAAKLLEIEYAPAAVGFDFGSGSRGRGASVSVRIAGIVVL
AEHKEAVEAVCEYLREEEEETARKRREAAALRVWAVVLAKLRISKRLDREHGLVEDSGED
SGEDSGEDSDENVPSVSQHEPVSQDDQDTAGGFVPEEPISQEVDSGGFLPQDTVAPPVLQ
DPSTSDLGAESDGDAAAYSDSEGYEFEYSD
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctgaggcgctgcgggagtcgagcggctcggacacgggctctgaggggtctgga
cggccattgaaacggcgcggcgggcgtcgaagccgcagcgacgagcgggagtcgggcaac
gacaagcgagcgaaaatcgagaccgcaaacgactcggtgatcgaggtttctgacggaagc
tcggtgtcgccgcagccaccacaaaccgaacctgtcggcacagaggtgattagtgtggac
agcgaagaggacgagtacagcgagtttgacgaggatttcgaggacgtcgatctaagcggt
ccggccccagatctcaaccgtgcagacttgtccgaggaaatcacagtttccgtctcgcga
ccgacgaaacagacgcgcaaacagaacctcgtgtcggccgacgagcgcatgttccgcaaa
acgctgcacatgctgtatttgtttgcgatggtggcccacggcgtggtgcgcaacacctgg
tgcagctcgcccgaggttttgcgcgtgctgcgcggccaggtgccgggcaagctgcttgca
gaggtagacgagttccacgagcagcagcagcgtgccgacgtgaccagcgcggccaagtcg
cgccgtctgctggacttgctgcgccacctgatgcagtactggtaccggagctggacactc
gaggcgcgccaccggggactgtacaagaagacgtgggaggagattgcgaaactgtgggag
cagccggctgttcagggcgagaacgtgacgaagacacggttcatcaggcggatggagcag
cggcgcggctcgcgcgacctcgcggcgcagggctttgtggcgctgctgcgtgcgctcgac
atcaattgccggctcgtattctcgctccagccaccagactttaccaacctggccgtcctg
gcatcgtctacgccgtccaatgggccctccaaagaaaccagcccagctcccaaatcttcg
ccgcgccggcgcaagaccgcgtcgcagcacgagcggctgctttctgctctgcgcgtcaac
aggcccgtttacaccaatttccggccagaaacacaggacgacgtacagtaccctgttttc
tggtgcgaggtctgggacagcgccagcaagcggttcaccagcatcgaccctatcgtccag
cgatacatcgagaacgtcggcacgcggtccaagttcgagtggcccaacaacaccacgtac
gtgctggcgtacgaccggctgggcggcgttcgcgacgtcacgcggcgctacagcgtgcat
ttcaacgccaagacgcgtaagaagcgtattacgagagacccgcgtggccaggattggtat
gacaagctattgcgtggcgcaaactcacggcgccggctcgcgagcaacaaaatcgaccag
tacgagcaggtcgagtttgaagagcgctcgctcaaggagggtatgcccaactcgattcag
gattttgtgaaccacccggtgtacgtgctagaggagcagctgaaggcgaacgaggtgctg
aagcccaagatcagctgcggaacaatccgcaagaagacgaaggccggaaaggcgggcgag
ctggtgccggtttaccgtcgctcgaacgtggttaccgtgcggtctgcaaaggcgtggttt
ctacggggcagggtgctcaagatcggggagcagccgctcaaggtgcgagagcagcgcaaa
cagcggccagatgatgatgacgacgacgtgagactgtatggagagcatcagacggagaag
tacgttccgccacccatcgtggacggcaagatcccgcgcaactcgtatggcaacatcgac
gtataccagccatggatgctgcccgagggaacggtgcacattccggagaaacaggccgag
aaggccgcaaaactgctcgaaatcgaatatgcgcctgcggcggtgggttttgactttggt
agtggtagcaggggccgcggagcaagcgtcagcgtgcgaattgctggcattgttgttctg
gcggagcataaagaggccgtcgaggcagtgtgcgagtatctgagggaggaggaagaggag
acggctcgcaaacgtcgcgaagctgcggcactgcgtgtgtgggccgtggtgctagccaag
ctgcggatttcgaagcgattagatagggagcatggattggtggaagattcaggagaggac
tcaggcgaggactcaggcgaagactcagacgagaacgttccatctgtaagtcagcacgag
ccggtgtcacaggacgatcaagacacagcaggcgggtttgtcccggaggaacctatttcc
caggaagtcgattctggtggatttctgccccaggatactgtagcaccgcctgttttgcaa
gacccgtctacgagcgatttaggagccgagagcgacggcgatgccgccgcttattccgac
tccgaaggctacgaattcgaatatagtgactaa
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