KEGG   Ogataea parapolymorpha: HPODL_01585
Entry
HPODL_01585       CDS       T08137                                 
Name
(RefSeq) DNA repair protein RAD4
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
opa  Ogataea parapolymorpha
Pathway
opa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:opa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HPODL_01585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:opa03400]
    HPODL_01585
DNA repair and recombination proteins [BR:opa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      HPODL_01585
SSDB
Motif
Pfam: Rad4 BHD_3 BHD_1 BHD_2 Transglut_core
Other DBs
NCBI-GeneID: 25771045
NCBI-ProteinID: XP_013933572
UniProt: W1QCN4
LinkDB
Position
VI:complement(807641..810073)
AA seq 810 aa
MLAEALRESSGSDTGSEGSGRPLKRRGGRRSRSDERESGNDKRAKIETANDSVIEVSDGS
SVSPQPPQTEPVGTEVISVDSEEDEYSEFDEDFEDVDLSGPAPDLNRADLSEEITVSVSR
PTKQTRKQNLVSADERMFRKTLHMLYLFAMVAHGVVRNTWCSSPEVLRVLRGQVPGKLLA
EVDEFHEQQQRADVTSAAKSRRLLDLLRHLMQYWYRSWTLEARHRGLYKKTWEEIAKLWE
QPAVQGENVTKTRFIRRMEQRRGSRDLAAQGFVALLRALDINCRLVFSLQPPDFTNLAVL
ASSTPSNGPSKETSPAPKSSPRRRKTASQHERLLSALRVNRPVYTNFRPETQDDVQYPVF
WCEVWDSASKRFTSIDPIVQRYIENVGTRSKFEWPNNTTYVLAYDRLGGVRDVTRRYSVH
FNAKTRKKRITRDPRGQDWYDKLLRGANSRRRLASNKIDQYEQVEFEERSLKEGMPNSIQ
DFVNHPVYVLEEQLKANEVLKPKISCGTIRKKTKAGKAGELVPVYRRSNVVTVRSAKAWF
LRGRVLKIGEQPLKVREQRKQRPDDDDDDVRLYGEHQTEKYVPPPIVDGKIPRNSYGNID
VYQPWMLPEGTVHIPEKQAEKAAKLLEIEYAPAAVGFDFGSGSRGRGASVSVRIAGIVVL
AEHKEAVEAVCEYLREEEEETARKRREAAALRVWAVVLAKLRISKRLDREHGLVEDSGED
SGEDSGEDSDENVPSVSQHEPVSQDDQDTAGGFVPEEPISQEVDSGGFLPQDTVAPPVLQ
DPSTSDLGAESDGDAAAYSDSEGYEFEYSD
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgcttgctgaggcgctgcgggagtcgagcggctcggacacgggctctgaggggtctgga
cggccattgaaacggcgcggcgggcgtcgaagccgcagcgacgagcgggagtcgggcaac
gacaagcgagcgaaaatcgagaccgcaaacgactcggtgatcgaggtttctgacggaagc
tcggtgtcgccgcagccaccacaaaccgaacctgtcggcacagaggtgattagtgtggac
agcgaagaggacgagtacagcgagtttgacgaggatttcgaggacgtcgatctaagcggt
ccggccccagatctcaaccgtgcagacttgtccgaggaaatcacagtttccgtctcgcga
ccgacgaaacagacgcgcaaacagaacctcgtgtcggccgacgagcgcatgttccgcaaa
acgctgcacatgctgtatttgtttgcgatggtggcccacggcgtggtgcgcaacacctgg
tgcagctcgcccgaggttttgcgcgtgctgcgcggccaggtgccgggcaagctgcttgca
gaggtagacgagttccacgagcagcagcagcgtgccgacgtgaccagcgcggccaagtcg
cgccgtctgctggacttgctgcgccacctgatgcagtactggtaccggagctggacactc
gaggcgcgccaccggggactgtacaagaagacgtgggaggagattgcgaaactgtgggag
cagccggctgttcagggcgagaacgtgacgaagacacggttcatcaggcggatggagcag
cggcgcggctcgcgcgacctcgcggcgcagggctttgtggcgctgctgcgtgcgctcgac
atcaattgccggctcgtattctcgctccagccaccagactttaccaacctggccgtcctg
gcatcgtctacgccgtccaatgggccctccaaagaaaccagcccagctcccaaatcttcg
ccgcgccggcgcaagaccgcgtcgcagcacgagcggctgctttctgctctgcgcgtcaac
aggcccgtttacaccaatttccggccagaaacacaggacgacgtacagtaccctgttttc
tggtgcgaggtctgggacagcgccagcaagcggttcaccagcatcgaccctatcgtccag
cgatacatcgagaacgtcggcacgcggtccaagttcgagtggcccaacaacaccacgtac
gtgctggcgtacgaccggctgggcggcgttcgcgacgtcacgcggcgctacagcgtgcat
ttcaacgccaagacgcgtaagaagcgtattacgagagacccgcgtggccaggattggtat
gacaagctattgcgtggcgcaaactcacggcgccggctcgcgagcaacaaaatcgaccag
tacgagcaggtcgagtttgaagagcgctcgctcaaggagggtatgcccaactcgattcag
gattttgtgaaccacccggtgtacgtgctagaggagcagctgaaggcgaacgaggtgctg
aagcccaagatcagctgcggaacaatccgcaagaagacgaaggccggaaaggcgggcgag
ctggtgccggtttaccgtcgctcgaacgtggttaccgtgcggtctgcaaaggcgtggttt
ctacggggcagggtgctcaagatcggggagcagccgctcaaggtgcgagagcagcgcaaa
cagcggccagatgatgatgacgacgacgtgagactgtatggagagcatcagacggagaag
tacgttccgccacccatcgtggacggcaagatcccgcgcaactcgtatggcaacatcgac
gtataccagccatggatgctgcccgagggaacggtgcacattccggagaaacaggccgag
aaggccgcaaaactgctcgaaatcgaatatgcgcctgcggcggtgggttttgactttggt
agtggtagcaggggccgcggagcaagcgtcagcgtgcgaattgctggcattgttgttctg
gcggagcataaagaggccgtcgaggcagtgtgcgagtatctgagggaggaggaagaggag
acggctcgcaaacgtcgcgaagctgcggcactgcgtgtgtgggccgtggtgctagccaag
ctgcggatttcgaagcgattagatagggagcatggattggtggaagattcaggagaggac
tcaggcgaggactcaggcgaagactcagacgagaacgttccatctgtaagtcagcacgag
ccggtgtcacaggacgatcaagacacagcaggcgggtttgtcccggaggaacctatttcc
caggaagtcgattctggtggatttctgccccaggatactgtagcaccgcctgttttgcaa
gacccgtctacgagcgatttaggagccgagagcgacggcgatgccgccgcttattccgac
tccgaaggctacgaattcgaatatagtgactaa

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