Ogataea parapolymorpha: HPODL_01618
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Entry
HPODL_01618 CDS
T08137
Name
(RefSeq) Protein required for transcription of rDNA by RNA polymerase I
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opa03021
]
HPODL_01618
Transcription machinery [BR:
opa03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
HPODL_01618
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
TFIIA
Motif
Other DBs
NCBI-GeneID:
25771077
NCBI-ProteinID:
XP_013933606
UniProt:
W1Q9N1
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Position
VI:complement(<861498..>863273)
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AA seq
578 aa
AA seq
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MQNMMSVQNAPLIDETLKRRYSDNEDVKRRKLDVSEEHGSEVQEEHASDPDFSGKVYSSL
VRSALDRMEKDDYSAIDALAAQLALPRSNTESISSDKLVQMLRVLTGEVTRLDNKASVAL
VQALLKIDWFEYESDDFSRAYSTFLSVLVSGIPKWWNEVATMLVGDFTRREQLDSHHSTL
KYIIQVIPTSTNAIPGILKRQFPNKTAPKADLVNYVRNLLFLLGYCDQVRHAVWQLIVEN
CIKLDVELQNELEELDDEDLEEALNSDEEEEDADDADELSDEDEFLDEEEYQVEIQKVSN
LSSKLDSVMRLLMDSAAPVFKQDLSAGIALFNTLATLFKSHVLPTHYTRCIQYLMFYVAQ
QHPDLTDSFLVMLIDIVFNVNEIGSNRVKAMQYVSSFIARAKSLSKQQLVFVIKYLTSWC
SVFVAERENEISNGHGGMERFKILYCVFQGLLYIFCFRHRELKNDKDEWELNLDKFFNKL
IISGFNPLKYCNETVVLIFARLAQQVDLCYCFSIIERNKRERLNGIKNMQAGSVFESKQE
FLDLEAYFPFDPLILKRSKELVEEHYVEWESIDDSESE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacatgatgtctgtacagaacgcaccactcattgacgagacgctcaagcgaagg
tactcggacaatgaggatgtcaaacggcgaaagcttgacgtgagcgaggagcacggttct
gaagtacaggaggaacatgcctcagatccagacttctcgggcaaagtgtatagttcgctg
gtccgttccgccctcgacaggatggaaaaggacgattactctgctatagacgcattggcc
gcacagctcgcactgcctcgaagcaataccgagtcgatctcgtcagacaagctggtgcaa
atgctgcgtgttctgaccggagaggtcacgagactcgacaacaaggccagcgtcgcgctt
gtgcaggcactccttaaaatcgactggtttgagtacgagagcgacgacttctccagggca
tattccacctttctgtctgtactcgtatctggaataccaaagtggtggaacgaggtggcc
acgatgcttgttggcgatttcacccgcagagagcagctcgactcgcaccatagtacgctc
aaatatattattcaggtgattccgacatcgacgaacgccattccgggtattttgaagcgc
cagttccccaataagactgctcccaaggccgatttggtgaactatgtgcgcaatctcctt
tttctgctgggctattgcgaccaggtgcgccacgctgtttggcagctgatcgtcgagaac
tgcatcaaattggacgtggagctacaaaacgagctcgaggagctggacgacgaggatttg
gaagaggcattgaacagcgacgaggaggaggaagacgcagacgatgccgatgagctcagc
gacgaagacgagtttctggacgaggaagagtatcaggtcgagatacagaaggtgagcaat
ctgtcgtcgaagctggatagtgtgatgcggctgctgatggactccgcggcgcccgttttc
aaacaggacctatctgcgggcattgctctgttcaatacgctggccacgctcttcaagtcg
cacgttcttccaacacattatacccgatgcatccaatatctcatgttctatgttgcgcag
cagcatccggacctcacagactcgtttctggtcatgttgatcgatatcgttttcaacgtc
aacgagatcggctcaaatagagtcaaggctatgcaatacgtgtcgtcgttcatcgccaga
gccaagagtctttcaaaacagcagctggtgtttgtgattaaatatctcacgtcgtggtgc
tctgttttcgtagcagagcgcgaaaatgaaatttctaacggccacggcggcatggaacgg
ttcaagatcctctactgcgtgtttcagggcctgctgtacatcttctgtttccgccacaga
gagctcaagaacgataaggacgagtgggagctgaatcttgacaaattcttcaacaaactt
attatctcgggcttcaacccactcaagtactgcaacgagaccgttgtgctgattttcgcg
cggcttgcacagcaggtcgacctctgctactgtttctcgatcatcgagcgcaacaaaaga
gagagactcaacggaatcaaaaatatgcaggccggctccgttttcgagagcaagcaagaa
tttctcgacctcgaagcttacttcccgtttgacccgcttattctcaaacgctctaaggag
cttgttgaggagcattatgttgaatgggaaagcatagacgacagcgaaagtgaataa
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