Ogataea parapolymorpha: HPODL_01790
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Entry
HPODL_01790 CDS
T08137
Name
(RefSeq) Eukaryotic translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opa03019
]
HPODL_01790
03012 Translation factors [BR:
opa03012
]
HPODL_01790
Messenger RNA biogenesis [BR:
opa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
HPODL_01790
Translation factors [BR:
opa03012
]
Eukaryotic type
Initiation factors
eIF-3
HPODL_01790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
RRM_1
Nup35_RRM
Motif
Other DBs
NCBI-GeneID:
25771247
NCBI-ProteinID:
XP_013933786
UniProt:
W1QA65
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All DBs
Position
VI:complement(1162165..1164333)
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AA seq
722 aa
AA seq
DB search
MPEPIAFDESQVDVSSIDFSDLEAQYHVPEPEHSYEHFVICDGAPIAPEAKAPVLKKVLT
KLFSQCGKVVDMFMPLENGQTKGYLIIELESAAAADKAVKQLNGKKLDVKHRLAVNKLPD
MEKYALNDNISEEFREPAIPEFRSHGYLKSWLLDPNGREQFMLHHHDTVGVYWYKKNIQP
EEVIEPRAHWTSASMKFSPKGTYLFSFFPGGVQAWGGEKFDRIRRFVHPGVQLLDFSPTE
KFLVTLSPEPITIPPEDHPARAQCLFSADSAGHKLVIWDLQTGLPVRTFALPPNLEKQQS
MPWPLIKWSFDDKYCARMGPDALAIYDTTQEFALLDKKLYKAEGIMDFEFAPAGVRLATT
RKNDPPETVFSFWTPETPNQSARVSVVQLPSRQVLRTVNLFNVSDVKLCWQDEAKLLCCK
VDRHTKSKKTTFTNLELLSLGEKDIPVEKVELKEVVSSFQWEPHGERFVTVSKLDTPNPN
IAIPDNIVSFYDVEEAKVAKQVIKKWLCYKTVTKTHANQIRWSPKGRFVVVATITGANGE
LDFYDSDYDGEKEKEQSDKVKSNLKLLNHHEYKGLTDLAWDPSGRYVAGWSSAWRHKIEN
GYRIYDLVGILRKEELIDGFREFEWRPRPPSMLSSNDKKKVRKSLKEYAAQFEEADAMEA
DAELRELILKRKRLLQEWYTWRKEVIAKLKELHLTQEQAETREEVIEEVKEEILEEKEEV
IE
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacccatcgcttttgacgaatcccaggtcgacgtctcgtcgatcgatttctcg
gacctcgaggcacaatatcatgtgcccgaaccagagcactcgtacgagcactttgtgatc
tgcgacggcgcccccatcgcgcctgaggcaaaggctcctgttttgaaaaaggtgctcacc
aagctcttttcccagtgcggcaaggttgtcgacatgtttatgccgctggaaaacggccag
accaagggctatctgattatagagcttgaaagcgccgccgcagccgataaggctgtcaag
cagctgaacggcaagaagctagacgtcaagcacagattggccgtcaacaagctgccagac
atggaaaaatacgccctcaacgacaacatctccgaggagttccgcgagcctgccattccc
gagttccgctcgcacggctacctcaagtcgtggctcctggaccccaacggccgtgagcag
ttcatgctccaccaccacgacaccgtgggcgtctactggtacaagaagaatatccagcct
gaggaggtgattgagccaagagcccactggacgtctgcgtcgatgaagttctcgccaaag
ggcacgtatctgttctcattcttccccggcggagtgcaggcttggggcggtgaaaaattc
gacaggatccgcaggtttgttcatccgggcgtgcagctactggacttttcgccaacagag
aagttcctggtgacgctgtcgccagagccgatcaccatcccgccggaagaccacccggcc
cgcgctcagtgtctattcagtgcagacagcgccggtcacaagctagtcatttgggatttg
cagaccgggttgccagtgcggacgtttgcgctgccaccaaacctcgaaaagcaacagtcg
atgccatggccactgatcaaatggtcttttgacgacaagtactgtgccagaatgggacct
gacgcgctggccatctatgacaccacacaggagtttgctctgctggacaagaagctgtac
aaagccgagggcatcatggactttgagtttgctccggccggcgtgagactggccaccacc
aggaaaaacgacccgccagagactgtgttctcgttctggacgccagagacaccaaaccaa
tcggcccgtgtttcggtggtgcagctgccgtcgcgccaggtgctgagaacggtgaacttg
ttcaacgtgtcggacgtgaagctgtgctggcaggacgaggccaagctactgtgttgcaag
gtcgaccgacacaccaagtcgaagaaaaccacgttcacaaacctggagctgctgtcgctg
ggcgaaaaagacattcctgtcgagaaggtcgagctcaaggaggtggtgagctcgttccag
tgggagccacacggagaacggtttgtgaccgtgtcgaagctggacacgccgaacccgaac
attgccattccagataacattgtatctttctacgacgtggaggaggccaaggttgcaaaa
caggtgatcaagaaatggctgtgctacaagacggtgaccaagactcacgcgaaccagatc
agatggtcgccaaagggccggttcgtcgtggtggccactatcaccggcgcgaacggcgag
ctcgacttctacgactcagattacgacggcgagaaggaaaaagagcagtccgacaaggtg
aagtcgaacctgaagttgctgaaccaccacgagtataagggcctgaccgacctggcgtgg
gacccgtctggaagatatgttgccggctggtcgtccgcctggagacacaagatcgagaac
ggctaccggatctacgatctggttggcattttgcgcaaggaggagctgatcgacggattc
agagagtttgagtggagaccaagaccaccatcgatgttgagctcgaacgacaaaaagaag
gtcagaaagagcttgaaggagtacgctgcacagtttgaagaggccgatgcgatggaggca
gatgccgagttgagagagctgattctcaagagaaagagactgttgcaagaatggtacacc
tggagaaaggaggtcattgccaagttgaaggagctgcatctcacccaggagcaggcagag
accagagaagaggtgattgaggaggtcaaggaagagatcttggaggagaaggaagaggtg
atagagtag
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