KEGG   Ogataea parapolymorpha: HPODL_01801
Entry
HPODL_01801       CDS       T08137                                 
Name
(RefSeq) Ribosome assembly protein SQT1
  KO
K14818  ribosome assembly protein SQT1
Organism
opa  Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:opa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:opa03009]
    HPODL_01801
Ribosome biogenesis [BR:opa03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    HPODL_01801
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz WD40 WD40_WDHD1_1st WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_HPS5 WD40_like Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 PQQ_2 CFAP43_N Beta-prop_TEP1_C DUF1942 Beta-prop_NOL10_N Cytotoxic
Other DBs
NCBI-GeneID: 25771258
NCBI-ProteinID: XP_013933798
UniProt: W1QBJ7
LinkDB
Position
VI:complement(1180837..1182051)
AA seq 404 aa
MDSEEPEYVNLQEVEEVVEDTGAEQFHSEDEMDEDDEPLEVDLSNNSQGYFDNHQDSVFV
VATHPSVPLIMTGGGDNVAYLWTSHTNPTKQVAKLEGYTESVIAGGFTADGSYLVTGDMT
GKVLVHKASKKFQVWNLYGTLEDVEEITWIKVHPKQNVFAFGASDGSVWVYQIEPTLEVI
FTGFSHSMECTNGMFINVDNLDELNLVTISEDGSIIGWNCFTQTQIYKIDADSGLKGVVT
PWVSMEADPNGKALVVGSRDSQVVVINSETGAIQNSFRVLELQEGQDVFEISIESISWCR
DPNLSLAALGLVSGDVFIFDTKTWKVRRTLKCSDAVTKLQFLENSPLLLGASMDGKVYKW
DSRTGEQLYAYVGHHMGVLDFALDNSKIRLITAGDEGVSLVFAL
NT seq 1215 nt   +upstreamnt  +downstreamnt
atggatagcgaagagccagagtacgtcaaccttcaggaggttgaagaggtcgtcgaggac
acaggcgcagaacagttccacagtgaggatgagatggacgaagatgatgagccattagag
gtcgacttgagcaataattctcagggttacttcgataaccaccaagattccgtctttgtg
gtggcaacgcatccttctgtgcccttgatcatgacaggaggaggcgacaatgttgcgtat
ctatggacctcgcacaccaatccgacgaaacaggttgccaagctcgagggatatacggaa
tctgtgatcgccggaggattcactgcagacggctcgtaccttgtcaccggagacatgaca
ggcaaagtgctagtgcataaggcgtccaagaagtttcaggtttggaatttatatggcacg
ttggaggatgtcgaggagatcacgtggatcaaggtgcatcctaaacagaacgtttttgca
ttcggagcaagtgacggctccgtgtgggtctaccaaatcgagcccactttagaggtgata
tttacaggtttttcgcactcaatggagtgcaccaatgggatgttcatcaacgtggacaac
ctggacgagctgaatctggtgaccatctcggaggacggctctattatcggatggaactgt
ttcacgcagacacaaatttacaaaatcgacgctgactcgggactcaagggggtggtaact
ccgtgggtttcgatggaggccgacccgaacggaaaggcgctggttgttggctcgagggac
tcgcaagtggtggtgatcaacagcgaaaccggtgccatccaaaattcgttcagggttttg
gagttgcaggagggccaggacgtttttgagatttcgattgagagtatcagctggtgtaga
gaccccaacctgtcccttgctgctctgggccttgtttctggagacgttttcatatttgac
accaaaacgtggaaggtgagacgcactctcaaatgctcggatgcagtgactaaactgcaa
ttcctcgaaaattcaccgctgcttttgggagcgtctatggacggaaaggtgtacaaatgg
gactcaagaacaggcgagcagctatacgcctacgtgggccaccacatgggcgttctggat
tttgcgcttgacaactccaagattagactgattacggcaggagacgagggtgtctccttg
gtgtttgccctataa

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