Ogataea parapolymorpha: HPODL_01801
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Entry
HPODL_01801 CDS
T08137
Name
(RefSeq) Ribosome assembly protein SQT1
KO
K14818
ribosome assembly protein SQT1
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opa03009
]
HPODL_01801
Ribosome biogenesis [BR:
opa03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
HPODL_01801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_like
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
PQQ_2
CFAP43_N
Beta-prop_TEP1_C
DUF1942
Beta-prop_NOL10_N
Cytotoxic
Motif
Other DBs
NCBI-GeneID:
25771258
NCBI-ProteinID:
XP_013933798
UniProt:
W1QBJ7
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Position
VI:complement(1180837..1182051)
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AA seq
404 aa
AA seq
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MDSEEPEYVNLQEVEEVVEDTGAEQFHSEDEMDEDDEPLEVDLSNNSQGYFDNHQDSVFV
VATHPSVPLIMTGGGDNVAYLWTSHTNPTKQVAKLEGYTESVIAGGFTADGSYLVTGDMT
GKVLVHKASKKFQVWNLYGTLEDVEEITWIKVHPKQNVFAFGASDGSVWVYQIEPTLEVI
FTGFSHSMECTNGMFINVDNLDELNLVTISEDGSIIGWNCFTQTQIYKIDADSGLKGVVT
PWVSMEADPNGKALVVGSRDSQVVVINSETGAIQNSFRVLELQEGQDVFEISIESISWCR
DPNLSLAALGLVSGDVFIFDTKTWKVRRTLKCSDAVTKLQFLENSPLLLGASMDGKVYKW
DSRTGEQLYAYVGHHMGVLDFALDNSKIRLITAGDEGVSLVFAL
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgaagagccagagtacgtcaaccttcaggaggttgaagaggtcgtcgaggac
acaggcgcagaacagttccacagtgaggatgagatggacgaagatgatgagccattagag
gtcgacttgagcaataattctcagggttacttcgataaccaccaagattccgtctttgtg
gtggcaacgcatccttctgtgcccttgatcatgacaggaggaggcgacaatgttgcgtat
ctatggacctcgcacaccaatccgacgaaacaggttgccaagctcgagggatatacggaa
tctgtgatcgccggaggattcactgcagacggctcgtaccttgtcaccggagacatgaca
ggcaaagtgctagtgcataaggcgtccaagaagtttcaggtttggaatttatatggcacg
ttggaggatgtcgaggagatcacgtggatcaaggtgcatcctaaacagaacgtttttgca
ttcggagcaagtgacggctccgtgtgggtctaccaaatcgagcccactttagaggtgata
tttacaggtttttcgcactcaatggagtgcaccaatgggatgttcatcaacgtggacaac
ctggacgagctgaatctggtgaccatctcggaggacggctctattatcggatggaactgt
ttcacgcagacacaaatttacaaaatcgacgctgactcgggactcaagggggtggtaact
ccgtgggtttcgatggaggccgacccgaacggaaaggcgctggttgttggctcgagggac
tcgcaagtggtggtgatcaacagcgaaaccggtgccatccaaaattcgttcagggttttg
gagttgcaggagggccaggacgtttttgagatttcgattgagagtatcagctggtgtaga
gaccccaacctgtcccttgctgctctgggccttgtttctggagacgttttcatatttgac
accaaaacgtggaaggtgagacgcactctcaaatgctcggatgcagtgactaaactgcaa
ttcctcgaaaattcaccgctgcttttgggagcgtctatggacggaaaggtgtacaaatgg
gactcaagaacaggcgagcagctatacgcctacgtgggccaccacatgggcgttctggat
tttgcgcttgacaactccaagattagactgattacggcaggagacgagggtgtctccttg
gtgtttgccctataa
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