Ogataea parapolymorpha: HPODL_01858
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Entry
HPODL_01858 CDS
T08137
Name
(RefSeq) elongation factor EF-1 alpha subunit
KO
K14416
elongation factor 1 alpha-like protein
Organism
opa
Ogataea parapolymorpha
Pathway
opa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HPODL_01858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opa03019
]
HPODL_01858
Messenger RNA biogenesis [BR:
opa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
HPODL_01858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
MMR_HSR1
HBS1_N
Ras
GTP_EFTU_D2
Roc
GTP_EFTU_D3
SpoIVA_ATPase
AAA_22
Motif
Other DBs
NCBI-GeneID:
25771314
NCBI-ProteinID:
XP_013933860
UniProt:
W1QAA8
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All DBs
Position
VI:1283491..1285651
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AA seq
711 aa
AA seq
DB search
MGGFDDDDLHDYENEDLGFDEDALNDDEYDQLYDALPKLKALAKNYQVDEKALKEILWSN
YFSVEDSFEEVKQNYKREYDEYVWVVPDGERPMSKLELLAQQRRERTGLRGLRSEGREGL
SGLLGRVKDTPKRERVRRPRPTETKQEEQTTAPKPDEQGVEEIQKPEETEPICLLPPLPS
TTSFNILTTTPSSLISLLFVRPTEPPSPLPNISLYTNSDLAKKAAANFAKPGPDDRKVEN
LTEKVAKIKIKEPKPVASKPKQKINIDAELAKKNSKPNLSFVVIGHVDSGKSTLIGRLLY
DLGIVDSKTLHKLTKESDAMGKSSFSLAWIMDQTQEERSRGVTVDICQTQIETPTQKFTI
IDSPGHKDYVPQMINGVSQADLAVMNIDANSFESGFSNQGQTKEHLTIAKSLGIERCVVT
INKLDVTQWSQTVYDAICDQIRQFLVDELAYDAANLVFVPTSGFLGDNVVKPSKNLSWYT
GPTLMQVLEQENRAVSHVVDKKSPFVMVISDIQESSKNDELVISGRINSGIIQPGESVSI
SPSQEVAVVDSISITASSVGSSVIKHDLQKLAQEGEFVELKLKKLASCENIKIGDVVTLA
SNVLQPVKKFKCELNLFNIERPLLVGTPFVLFKNGISVPSRLSEIESIVTKDGRSKKRRH
LSSNNKAVVVVELLERELPLLTVAQHHKLGRVVVRKDGLSIGAGKILELVA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggggggcttcgatgacgacgacttgcacgattacgaaaacgaggatttggggtttgac
gaagacgcgttgaacgatgacgaatacgaccaattgtacgacgctcttcccaaactcaag
gcccttgcgaagaattaccaggtcgacgaaaaggcgttgaaagaaatcctatggagcaat
tatttcagcgtagaagactcctttgaggaggtgaagcagaactacaagcgtgagtatgat
gagtacgtgtgggtggtccctgacggtgaacggccaatgtctaagctggagctgctggca
cagcaacgcagagaacgcacgggcctgcgcgggctcaggagcgagggcagagagggtttg
tctggtcttcttgggagggtcaaggatacgccaaaacgggagagagtcagaaggcctaga
ccgactgagaccaaacaggaggagcaaactactgctccaaaaccggatgaacagggggtt
gaggaaatacagaaaccggaggagaccgagcccatctgcctacttcctccgcttccgtct
accacatcatttaacatactgactaccactccgtccagcctaatttctctcctttttgtg
cgccccacagagccaccgtctccgttgcccaatatcagtctatatactaactccgatcta
gcgaagaaagccgctgcaaattttgcgaagccgggccccgacgaccgcaaagtggagaat
ctcacagagaaggtggctaagatcaagataaaagagccaaagccggtggcatcgaagccg
aaacagaaaattaatattgacgcagaactggcgaagaaaaacagcaagccaaatttgtcg
tttgtcgtgatcggccacgtcgactccggcaagtccacgctgatcggccggctgctatac
gatctgggcattgtcgactccaagacgctgcacaagctcactaaagagagcgacgcgatg
ggcaagtcgtcgttctcgctcgcctggattatggaccagacgcaggaggagcgttcccga
ggcgtcaccgtcgacatttgtcagacacagatcgagaccccaacgcagaagtttaccatt
atcgactctccgggccataaagactacgttccgcagatgatcaacggtgtgagccaggcc
gacctagcggtcatgaacatcgacgcaaactcgttcgaaagcggtttcagcaaccagggc
cagaccaaagagcacctgaccattgccaaaagtctcggcatcgagcggtgtgtggtgact
atcaacaagctggacgttacgcagtggtcgcagacggtgtacgacgcgatctgcgaccag
attagacagtttctagtcgacgagctggcgtacgacgcggcgaacctggtttttgtgccg
acgtcgggtttcctcggcgacaacgttgtcaagccaagcaagaatctgtcgtggtacacg
ggtccgacgctgatgcaagttttagagcaggaaaatagagcagtcagtcacgtggtggac
aagaaatcgccttttgtcatggtaatcagcgacatccaagagtccagcaagaacgatgag
ctggtgatcagcgggcggatcaactcgggcatcatccagcccggcgagagcgtgagcatt
tctccgagccaggaggtggccgtcgtggactcgatctcgatcacggcgtcgagcgtcggg
tcgtcggtgatcaagcacgatctgcagaaacttgcacaggagggcgagtttgtggagctg
aagctgaagaagctggcgtcgtgtgaaaacatcaaaattggagacgtggtgactttggcg
tcgaacgttctgcaacctgtgaaaaaattcaagtgcgagctaaacctgttcaacatcgag
cggccgcttctcgtgggcacgccgttcgtgctgttcaagaacgggatctctgtgccgtca
cggctgagcgagatcgagtcgatcgtgacgaaagacggcaggagcaagaaacggcgccat
ctgagctcgaacaacaaggccgtggtggtggtagagctgctcgaacgagagctgcccctc
ctgacagtcgcacagcaccacaagctgggccgcgtggtggtccgtaaagacgggctgagc
atcggcgccgggaaaatcctcgagctggtggcataa
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