Ogataea parapolymorpha: HPODL_01881
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Entry
HPODL_01881 CDS
T08137
Name
(RefSeq) Subunit of the vacuole fusion and protein sorting HOPS complex and the CORVET tethering complex
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
opa
Ogataea parapolymorpha
Pathway
opa04138
Autophagy - yeast
opa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
HPODL_01881
04148 Efferocytosis
HPODL_01881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opa04131
]
HPODL_01881
Membrane trafficking [BR:
opa04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
HPODL_01881
Hops complex
HPODL_01881
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
B-prop_COPA_B_2nd
Talin_IBS2B
Motif
Other DBs
NCBI-GeneID:
25771337
NCBI-ProteinID:
XP_013933885
UniProt:
W1QAD6
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Position
VI:1328936..1331335
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AA seq
799 aa
AA seq
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MSSPSLGWERLQTVFYRSRPLFALKWEDVNLKDSMVAIGPYAAAIAVFPHTMGTAIEIYS
GSGSPLASIPWNTKAGNIASFGWTGRCELVVVLRHGKYRVYTDYDGEFEEYDIGSEVIDV
RFWNNGLVVRTIDGFKSFAYGNDVVNEFPIVEGSIVGWAIIPPVYHTPLKLVISTQDGVL
LIDQRIKDTKQNEQGPYSLISASPNGDFVALYGDGSVLIVTSDFTTTLNVFRCESSVPLQ
LEWCGNDAVVVSYEDEMLLIGPSDESITFYLDSPAIVRPEVDGFLYLDNSNLQFVSRVSN
YTVETFRIGSTSASAILLDAIEQIDQRSPKANENLEIIADNLADAVDHCIRAASEEFDPY
WQKKLLRAATFGKTTLDMYNSDEFVETCNNLRILNIIRQPEIGIFLTYNQFIELGLDRLI
DLLLLRKLHYLCLKIADFMSLPKDNIYINWACAKIRKSDLNNDELLQELLKRLQDKTVSF
AQIAQAAYVEGRADLATKLLSLEKDVSLAVPMLLEMDQDSYALNKAEESMDTDSILYILV
TLLNKVSVPDLLKMLNRKKNASGLFITQLASRDLQLLNDYYYKEDSIFGLTMVNLQKLAQ
ETEIDRQKQLLNKASQTLQRSKYMKTESKWLKDEAKNLEIIGPIESGLNTKTSSHLELLE
MLLKADFKKAVKLQKDLKISDKQFYYKVLKTYIQLPEKRRELYDFATQKQSPIGYEPFYT
ESLKVGDKRHASLYLGHCTNMPYKTKIKCYLSCDDHKGAIEEAFKRKDADMIRLIKDLAG
NTVHIHLADDYIERLTGRR
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctccaagtttgggctgggaacgattgcagactgttttttaccgcagtcgcccg
ctctttgccctgaaatgggaggatgtaaacctgaaagatagcatggtggcaattgggccc
tatgctgctgcaattgctgtgtttccacatacgatgggaacagcgatagagatctactcg
ggatctggatctccactcgcctccattccctggaacacaaaagctggcaacattgccagt
tttggatggacagggcggtgcgagctagtggtggttttacgccacgggaagtaccgtgtg
tatacagattatgacggagagtttgaagagtacgatataggatctgaggttatcgatgtc
cggttttggaataatgggcttgtcgtgcgcacaattgacgggttcaagagctttgcttat
ggcaacgatgttgtaaacgagttcccaatcgtggaaggatccattgttggatgggctatc
atccctcctgtctaccacactccgctgaaacttgttatttccactcaggatggggttctg
ctgatagaccagcgcataaaggacaccaagcagaacgaacagggaccgtacagcctgatc
tctgcctcaccaaatggagactttgtggcactgtacggcgatgggagtgtgttgatcgtg
acaagcgacttcacaaccaccttaaacgtgtttagatgcgagtcaagcgtgccattgcag
cttgaatggtgcggaaacgatgctgtggtggtaagctatgaagacgagatgctgctgata
gggccgtccgacgagtccatcaccttctatctagactcgcccgcgatcgtgcggcctgag
gtggacggatttctgtatcttgacaattccaatctgcaatttgtctcccgagtcagcaac
tacacagtcgagacgttcaggattggctctacttcggcaagtgcgattttgctggatgcc
atcgaacagatcgaccagcggtcgccaaaagccaacgaaaacctggaaatcatagcggac
aatcttgctgacgcggtcgaccactgcatccgagccgcctccgaagagtttgatccgtac
tggcaaaagaaacttctgcgagcagctacctttggtaaaaccactttagacatgtacaac
tccgacgaatttgtcgagacgtgcaacaacctgcgaatactcaacattatcagacaaccg
gaaatcggaatattcctcacatacaaccaatttatagagctggggctggatagactgata
gatctgcttcttttgcgcaaattacattatctctgtctgaaaatagcagatttcatgagc
ttacctaaagacaacatctacatcaactgggcgtgtgccaagatccgcaaatcagacctt
aataatgacgagctgctgcaggaattactcaaaagacttcaggacaagactgtttctttc
gcacagatcgcacaagctgcctacgtcgaaggccgtgcagacctggctacaaagctgctg
agtttggagaaggatgtcagtctggcagtgccgatgctgctggaaatggaccaggatagc
tatgcgctcaacaaggcagaagaaagcatggacacagactctattctgtacatccttgtg
accttgctaaataaggtttcagtgcccgacttgctgaaaatgctcaacaggaaaaagaat
gcttcgggacttttcattacccagctggcatcgcgggatctgcagctgttgaacgactac
tattacaaggaagactcgatatttggattgacaatggtgaatctgcagaaactcgcacag
gaaaccgaaattgacaggcaaaaacagctgttgaacaaagcttctcagacactgcagaga
tcgaagtacatgaaaacagagtccaagtggctcaaagacgaggctaaaaaccttgaaatt
ataggccctatagagtcggggcttaacaccaagacgtcttcgcatttagagctcttggaa
atgctactcaaggccgattttaagaaagcagtaaaactacaaaaagatctcaaaatatca
gacaaacagttctactacaaagtgctcaagacatacatccagcttccagaaaaaagacgc
gagctatatgactttgccacacaaaagcagtcacctataggctacgaaccattttacaca
gagtcattgaaagtcggcgacaaacgacacgcgtcgctgtatttaggccattgtacaaac
atgccgtacaaaaccaaaatcaaatgttatcttagctgtgatgaccacaaaggtgcgatc
gaagaagctttcaagcggaaggatgctgatatgatcaggcttatcaaagatttggcaggc
aacacagtgcatatccatctggcagatgactacatcgaacgtctaactggaagacgctga
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