KEGG   Ogataea parapolymorpha: HPODL_01903
Entry
HPODL_01903       CDS       T08137                                 
Name
(RefSeq) Pre-mRNA-splicing factor CEF1
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
opa  Ogataea parapolymorpha
Pathway
opa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:opa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HPODL_01903
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:opa03041]
    HPODL_01903
   03400 DNA repair and recombination proteins [BR:opa03400]
    HPODL_01903
Spliceosome [BR:opa03041]
 Complex B
  Other components
   Prp19 complex
    HPODL_01903
 Complex C
   Prp19-CDC5 complex
    HPODL_01903
DNA repair and recombination proteins [BR:opa03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    HPODL_01903
SSDB
Motif
Pfam: Myb_DNA-binding Myb_DNA-bind_6 Myb_DNA-binding_7 Rap1_C
Other DBs
NCBI-GeneID: 25771358
NCBI-ProteinID: XP_013933908
UniProt: W1QBV6
LinkDB
Position
VI:complement(1358863..1360578)
AA seq 571 aa
MAPIYVKGGVWTNVEDAILKAAISKYGLNQWARVSSLLEKKTAKQCKMRWQEWLDPRIKK
LEWTKEEDQKLLELVRLRPNQWNSVSMLMNRTANQCIERYQQLLDDNLDDSDLRLTGNMQ
QAASGADSLNLNPESKPARPDFEDMDDDEREMLSEARARLANTQGKKAKRKARERMLAES
RRVAIVQKRRELKQAGINSKFRTKKKFATQMDYNNDVAFAREPEEGRFDTSEEKLQNHRE
RHEFDEKAERNQAPNLEHDKQDKKRRRQAKEAHTTFQGAAQSYDDDLEFKKRKLELSAPE
EDQKVVDIDAKIKDATKELNRATHEKSILFTKADEDEEEESDPLEPKESLSSKLAKLPAP
LNDFEIMDSDGEQEPMPQPEPKIETVSVRDVPKAETVHKIADLKLPAPDHKSLLELAKQS
SGVDRLVLEEMARLVEGEVSGVENPEIVEAAIEAELSTLDYNKYVAVVENGSATDNAEQL
LKNIRQVSEQSGRLEKKFAALTNGYLRNQAALCKDIANKYGVLSDLDRECVVYEQVKRLE
ERAIDYRSSSLQESIDRMSVAIGEAQQRLRN
NT seq 1716 nt   +upstreamnt  +downstreamnt
atggcccccatatacgtgaagggaggagtttggactaatgttgaggacgccattctcaaa
gctgcgatctcgaagtatgggctaaatcaatgggcccgtgtgagctccttgctggagaag
aaaacggcgaaacaatgtaagatgagatggcaagaatggctcgatccaagaatcaaaaag
ctcgaatggaccaaagaggaagaccaaaaattgctcgagcttgttcggctccgcccaaac
cagtggaacagtgttagcatgctgatgaatagaacggcaaaccagtgtatcgaaagatac
cagcagcttttggatgataatctggacgactccgatttacggcttacaggaaacatgcaa
caggcagcttcgggcgcagattccttaaacttaaaccctgagtcgaagcctgctcgtcct
gatttcgaggatatggacgatgacgaacgcgaaatgcttagcgaggcccgtgcgagactg
gccaacacgcagggcaaaaaggcaaagagaaaggcgcgagagagaatgctggctgaaagt
cggcgcgttgcaattgtccagaaacggcgagagctcaagcaggcaggcataaactccaag
ttccgcaccaagaagaaatttgctacgcaaatggattacaataacgatgttgcatttgct
agggagccggaagagggcaggtttgataccagcgaggagaaattgcaaaatcacagagaa
cgacacgaatttgatgaaaaagcagagcgcaaccaagctccaaatctggagcatgacaaa
caagataagaagcgacggagacaggccaaagaggctcatacgacatttcaaggagcagcc
cagagctacgacgacgaccttgagttcaagaagaggaagctggagttgagtgcaccagag
gaggaccagaaagttgtggatattgacgcgaagatcaaggatgcaaccaaggagctgaat
cgtgccacgcatgaaaagtctattttatttaccaaagctgacgaggacgaagaggaggaa
agcgatccattggagccaaaagaatcgctgagtagtaagctggccaagctccctgctcca
ctgaatgactttgagatcatggatagcgacggcgagcaggagccgatgccacagccggaa
cccaaaatagaaactgtgtcggtgcgggatgttcctaaagcggaaacagttcataaaatc
gccgatctgaagctccctgctcctgatcacaaaagcctgttagaattagccaaacagtca
tccggggtggacaggctggttctggaggagatggcccgtcttgtggaaggcgaggtgtct
ggggtggagaacccagaaattgtggaagcggctatagaagcggaattatcaacgctggac
tacaataagtacgttgcagtggtggaaaatggttctgccacagacaatgcggagcagcta
ctaaagaacatcagacaagtttcggaacagtcaggtcggctagagaaaaagtttgcggcc
ctaactaatggttatctccgcaaccaggctgccctgtgcaaagacatagccaacaagtac
ggggtgctcagtgacttggacagagagtgtgttgtgtacgagcaggtgaagaggcttgag
gagcgtgcaatcgactatagatcctcaagtttgcaagaatcaatagacagaatgagcgtc
gccattggcgaagcccagcaacgtttacgtaactga

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