Ogataea parapolymorpha: HPODL_02074
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Entry
HPODL_02074 CDS
T08137
Name
(RefSeq) Coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opa04131
]
HPODL_02074
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
opa04147
]
HPODL_02074
Membrane trafficking [BR:
opa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
HPODL_02074
Exosome [BR:
opa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
HPODL_02074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
Cnd1
Coatomer_g_Cpla
FANCI_S2
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
25771529
NCBI-ProteinID:
XP_013937160
UniProt:
W1QLL4
LinkDB
All DBs
Position
I:complement(447977..450839)
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AA seq
942 aa
AA seq
DB search
MSADVAYTLVYEPNTANKTSVNEFKNQLEKGDDERKIEVMKQILITMLNSDPMPGLLMHI
IRYVMPSRNKDLKKLLYFYWEICPKYEQDGKLKHEMILVCNAIQHDLQHANEYIRGSTLR
FLSKLKEPELLEPLVPSARQCLEHRHAYVRKNAVFAIYSVHLVSDHLIPDAAELLADFLA
VENDPTCKRNAFVCLGHLDREAALRFIQSQAVTSIDPIIQLAVIEFIRKDAVSNPELKPQ
YLHIISELLESSNNAVIYEAASTLSVLSHSQAAITSAASKFIELAVKEPDNNVKLIALEI
VNELHRKHEDMLDDMCLDILRVLSAPSLDVRQKAIEITLSLVTSKNVDDVVKLLKKELQK
TTTSNEEKSSEYRQLLISAIHSCAIRFHEVAASVVDLLLDFISELNTTAAAEVITFVKQV
VEKFPDLRSHIIQRLIVSLKTIKSGKIFRGSLWIIGEYSLDEKDIQTAWKAIRASIGDIP
ILAAEKKGHDEEQEEEVKTNGHTGPKILADGTYATEVALGDSKTTAVSTATKHPLRALLL
EGDFYLGSVLASTLVKMVLRLSKITSKTDLLNALKAEAMLIMVSILRAGESSLVKKRIDE
DSAERILSCVRFLSEEGKDESLIDEAFLDDTKKAYKQQLAAEAQQLKDKEQASVQNNAEQ
VDDAIVFRQLNTKDKVEDLDEEDLTLAAGATVVKEDLSSRLKKIKQLTGFSDPVYAEAYV
KVHQFDVTLDVLLVNQTTETLRNLSVEFATLGDLKVVDKPTTQNIGPHAFHRVQTTIKVT
SADTGVIFGNIVYDGQHADENTIVILSDLHVDIMDYIKPATCTEAQFRKMWNEFEWENKI
SVKSNLPTLKEYLDELLEGTNMNNLTPGAVIGEECQFLSANLYSRSSFGEDALANLCIEK
TAEGPIVGHVRIRSKGQGLALSLGDKVAAIARKTSQAVVSQV
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagacgttgcatatacgttggtttacgaacccaacaccgcgaataagacctcg
gtcaatgagttcaaaaaccagcttgagaagggcgacgacgagcgcaagatagaggtgatg
aaacagatcctcatcacaatgctcaattcggacccaatgcccgggctgttgatgcacatc
atccggtacgtgatgccgtcgagaaacaaggatctcaagaaactgctctacttctactgg
gagatctgtccgaaatacgaacaggacggcaagctcaagcacgagatgatccttgtgtgc
aatgccatccagcacgacctgcaacacgctaacgagtacatccgcggcagcacgctgagg
tttctttcgaagctgaaggagccggaattattggaaccactggtgccttctgccagacag
tgtttggaacaccgtcatgcgtacgtccgcaaaaacgccgtctttgccatctattctgtc
catctggtgtccgatcatctgatcccagacgcggcagagctattggcagactttttggcc
gtcgagaacgaccctacatgcaaacgcaatgcctttgtttgtctcggacatctggacaga
gaagctgctctgcggttcatccagtcgcaggcggtgacgtccatcgatccaatcattcag
ctggccgtcatcgaattcatcagaaaggacgccgtgtccaacccggagctcaaaccacag
tatttgcacatcatctccgaactgcttgaatcgtccaacaatgcggtgatttacgaggct
gcctctactttgagcgttctgtctcactcacaagcagctatcaccagtgctgcatcgaaa
ttcatcgagctcgccgtcaaggagcccgacaacaacgtcaaactaattgctctagagatc
gtcaacgagctgcaccgcaagcacgaagacatgctggacgacatgtgtctcgacatcctc
cgggttctgagtgccccatcgctcgatgtgagacaaaaagccattgaaattactctgtcg
ctggttaccagcaaaaacgtcgacgatgtggttaaattgctgaagaaagagctccagaaa
accaccacgtccaacgaagagaaatcttccgaatacagacagctcctgatttctgccatc
cactcctgtgccatcagattccacgaggtggccgccagcgttgtcgacctgctgctggac
ttcataagcgagctgaatacgaccgccgctgcagaggtcatcacttttgtcaaacaggtg
gtggaaaagttcccagacctcagaagccacattatccagagactgattgtgtcgctcaag
acgatcaagagtggcaagatcttcagaggcagtctgtggatcatcggagagtactcgctg
gacgaaaaggacatccagactgcctggaaggccatccgggccagcatcggcgacattcct
attctggctgccgagaagaagggccacgacgaggagcaggaagaggaggtcaagaccaat
ggccacaccggtccaaagatcctggcggacggcacctatgccaccgaggttgccctaggc
gactctaaaactactgccgtgtctacggctaccaaacacccgctcagagctttgcttttg
gaaggtgatttctatttaggctctgttctggcctccactctggtcaagatggtgttgaga
ctgagcaagatcactagcaagaccgacctgctgaatgctctaaaggcggaggccatgttg
ataatggtgtcgattttgagagcgggcgagtcgtcgttggtgaagaagcgcattgacgag
gactctgcagagagaatattatcgtgcgtgaggtttttgagcgaggaaggaaaagacgag
tcgctgatcgacgaggcgttcctcgacgacaccaaaaaggcatataagcagcaattggct
gctgaggcgcaacagctcaaggacaaggagcaggctagcgtccagaacaacgccgagcag
gtcgacgacgccattgtgttcagacagctaaacaccaaggacaaggtggaagatctggac
gaggaggacctgacgcttgccgcgggggccaccgtcgtgaaggaggatctgtcgtcgaga
ttgaagaagatcaagcagctgacaggtttctcggaccctgtgtatgcggaggcctacgtc
aaggtgcaccagttcgacgtgacgttggacgttctattggtgaaccagactacagaaact
ctgagaaacctgagcgtcgagtttgccacgttgggagacctcaaggtggtggacaagccg
acgacccagaacatcggtccgcacgcgttccatcgcgtccagaccacgatcaaggtgacc
tctgccgacacgggtgtcattttcggaaacatcgtttacgacggccagcacgccgacgag
aacaccattgtgatcctctcggacctgcacgtggacatcatggactacatcaagcctgct
acgtgcacagaggcgcaattcagaaagatgtggaacgagttcgaatgggagaacaagatc
agcgtgaagtccaaccttccgacgctgaaggagtacctggacgagctcttggagggcacc
aacatgaacaacctgactccgggcgcagtgattggcgaggagtgccagtttttgtctgcc
aacctatactcgagatcgtcctttggcgaggatgctctggccaacctgtgtattgaaaag
accgcggagggccctatcgtgggccatgtgcggatccggtccaagggccagggtttggct
ctgtccctgggagacaaggttgccgccattgcgcgcaagacgagccaggccgtggtgtcg
caggtgtaa
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