Ogataea parapolymorpha: HPODL_02081
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Entry
HPODL_02081 CDS
T08137
Name
(RefSeq) Replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
opa
Ogataea parapolymorpha
Pathway
opa03030
DNA replication
opa03410
Base excision repair
opa03420
Nucleotide excision repair
opa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPODL_02081
03410 Base excision repair
HPODL_02081
03420 Nucleotide excision repair
HPODL_02081
03430 Mismatch repair
HPODL_02081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
opa03032
]
HPODL_02081
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_02081
03400 DNA repair and recombination proteins [BR:
opa03400
]
HPODL_02081
DNA replication proteins [BR:
opa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
HPODL_02081
DNA Replication Termination Factors
ELG1-RFC complex
HPODL_02081
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
HPODL_02081
DNA repair and recombination proteins [BR:
opa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
HPODL_02081
Check point factors
HRAD17(Rad24)-RFC complex
HPODL_02081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
AAA_assoc_2
Rad17
RCF1-5-like_lid
AAA_22
RuvB_N
AAA_14
ResIII
AAA_16
AAA_11
DUF815
AAA_24
AAA_30
AAA_7
Mg_chelatase
AAA_5
DEAD
bpMoxR
AAA_18
nSTAND3
AAA_3
ATPase_2
AAA_19
AAA_28
Viral_helicase1
IstB_IS21
RNA_helicase
TIP49
AAA_2
SRP54
AAA_33
LpxK
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
25771536
NCBI-ProteinID:
XP_013937168
UniProt:
W1QJE9
LinkDB
All DBs
Position
I:463704..464681
Genome browser
AA seq
325 aa
AA seq
DB search
MSSDNLPWVEKYRPAKLDDVYGQKDVVQTVRKFAKEGRIPHLLFYGPPGTGKTSTIIALA
RELYGKNYRNMVLELNASDDRGIDVVRDQIKNFASTRQIFNSGFKLIILDEADAMSNAAQ
NALRRVIEKYTKNTRFCILANYSHKLNPALLSRCTRFRFSPLADSALQDRVDYVIKAEGL
KIASDARQSLLELSEGDMRRALNVLQACATAVESGEEITQDMVYECVGAPRPQSVMTVLD
AIMSNDWTDAYATMTKIRKTEGLALVDLMSGFVSVLDKYELKPRTRMAVLQGLGDIEYSI
SKGGSDKIQCTAVIGVIKNALENEN
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagacaaccttccgtgggtggaaaagtaccgcccagcgaagctggacgacgtg
tatggccagaaagatgttgtgcagacggtgcgcaagtttgcgaaggaagggcggattccc
cacctgctgttctacggtcctcccggtacaggcaaaacgtccaccatcatcgcattggcc
cgcgagctgtacgggaaaaactacagaaacatggttctcgagctaaatgcgtcggacgac
cgaggaatcgacgtggtgcgcgaccagatcaagaactttgccagcactagacagattttc
aacagcggattcaagctgatcattctggacgaggccgacgcgatgtcgaacgcggcgcag
aatgctctgcggcgggttattgagaagtacaccaagaacacgcggttctgcattctagcg
aattactcgcacaaattgaaccctgctcttctttcacggtgcacgcggttcaggttctcg
ccgctggccgattcggcgctacaggaccgtgtggactacgttatcaaggctgaaggcctg
aaaattgcttccgatgcgcgccagagccttctggagctgagcgaaggcgacatgagacgg
gcactcaacgttttgcaagcgtgtgctaccgcggtcgaatctggcgaagagatcacccag
gacatggtgtacgagtgtgtgggtgctccgagaccgcagtctgtgatgacggtgcttgat
gcgatcatgtcgaacgactggacggacgcctatgccacgatgaccaaaatccgcaagaca
gaggggcttgctttggtggacctgatgagcggctttgtgagcgtgctggacaagtacgag
ctcaaaccaaggacgcggatggctgttttgcagggcttgggtgacattgagtacagcata
agcaagggtggcagcgataagattcagtgcacagccgtgattggtgtgataaaaaatgca
ttggaaaatgagaattag
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integrated database retrieval system
