Ogataea parapolymorpha: HPODL_02200
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Entry
HPODL_02200 CDS
T08137
Name
(RefSeq) Eukaryotic peptide chain release factor GTP-binding subunit
KO
K03267
peptide chain release factor subunit 3
Organism
opa
Ogataea parapolymorpha
Pathway
opa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HPODL_02200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opa03019
]
HPODL_02200
03012 Translation factors [BR:
opa03012
]
HPODL_02200
Messenger RNA biogenesis [BR:
opa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
HPODL_02200
Translation factors [BR:
opa03012
]
Eukaryotic type
Release factors
HPODL_02200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
25771655
NCBI-ProteinID:
XP_013937297
UniProt:
W1QKS9
LinkDB
All DBs
Position
I:645556..647499
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AA seq
647 aa
AA seq
DB search
MSNPNQQNNQDDLSQGMQNLNVGGQQFNPNAAPSFVPGQFGQQFGQYQQFNQYQQYNQQY
GQYQQYGQYVPPQSFGYDARDPYAAQPQQQSNHMSLEEYQKQQQESLNKSTKPKTKLKLN
LNSSTVKAPVKKKEEPKKEEPKETKQEPKQEPKQETKQETKQDIKPEVKAAPKPEPKADA
KADAKTASKPQKTDKSVAPSSVIREQEQQLDESVLQDMFGGKDHMSIIFMGHVDAGKSTM
GGNILYLTGAVDKRTVEKYEREAKEAGRQGWYLSWIMDTNKEERNDGKTIEVGKSYFETQ
KRRYTILDAPGHKLYISEMIGGASQADVGILVISARKGEYEAGFERGGQSREHAILAKTQ
GVNKLVVVINKMDDPTVNWSEERYNECISKLSAYLKGVGYQKNDVVFMPVSGYTGAGLKD
RVKPEECPWYTGPSLLEFLDNMPLAARKINDPFMLPISGKMKDLGTVVEGKIESGHVKKG
QQLIMMPNKIQVEVLTIYNETEAEVDTAVCGEQVRMKLKGVEEEEVSAGYVLSSTLNPVK
TVTRFEAQIAIVELKSILSSGFSCVMHVHTAIEEVTFTKLLHHLQKGTNRKSKKPPAFAK
QGMKIIAELETAMPVCLETYEDYPQLGRFTLRDQGQTIAIGKVTKLL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccctaaccagcaaaacaaccaggacgacttgtctcaggggatgcaaaatttg
aacgtggggggccaacaattcaacccgaacgcggctccttcgtttgttcccggccaattt
ggacagcaatttggacagtaccagcaattcaatcaataccaacaatataatcagcaatac
ggccagtaccagcaatatggccagtacgtgccgccacagtcatttggctacgatgcccgc
gacccatacgctgctcagccacaacaacagagcaaccacatgtccttggaagagtaccag
aaacaacaacaggagtcgctcaacaagagcaccaagcctaagaccaagctgaagttgaac
ttgaacagcagcaccgtcaaggcgcctgttaagaagaaggaggaacctaaaaaagaggag
ccgaaagaaacaaagcaagagccaaaacaggagccgaaacaggagaccaagcaggagacc
aagcaggatatcaaaccggaggtcaaggccgctcccaagccagaaccaaaggctgacgcc
aaagccgacgccaagactgcctccaagccacagaagacagataagtctgtggctccatct
tctgtcattagggaacaggagcaacagctggacgagtccgttttgcaggatatgtttggc
ggaaaagaccacatgtcgattatcttcatgggccacgtggatgccggaaaaagtaccatg
ggaggtaacattctttatctgactggagccgttgacaagagaacagtggaaaagtacgaa
agagaagccaaagaggccggaagacaaggttggtacttgtcctggatcatggacaccaac
aaggaggaaagaaacgacggaaagacaattgaggttggaaaatcctacttcgagacccaa
aagagaagatacactatcctggatgctccaggccacaagctgtacatttccgagatgatt
ggaggagcttctcaggcagatgttggtattttggttatttctgcccggaagggagagtac
gaagccggtttcgagagaggaggacaatccagagagcatgctattctggccaagacgcaa
ggtgtcaataagctggttgtggtgatcaacaagatggacgatcctaccgtcaactggtct
gaggagagatacaacgagtgtatcagcaagctatctgcttaccttaagggtgttggatac
caaaagaacgatgtcgttttcatgcccgtttccggctacactggtgcaggtttgaaggac
cgtgtcaagccggaagagtgtccttggtacacaggaccttctctgctggagttccttgat
aatatgcctcttgctgccagaaaaatcaatgatccatttatgctgccaatttccggtaag
atgaaagacctgggtacggtggtcgagggtaagatcgagtctggacatgtcaagaaggga
caacagctcataatgatgccgaacaagatacaggtcgaggtgctgaccatctacaacgag
actgaggcagaggtcgacacggccgtttgcggagagcaggtgagaatgaaactgaagggt
gttgaggaagaagaggtgtctgccggttacgtgctctcttccacgctcaacccagtcaag
accgtgacccgattcgaggcccaaatcgccattgttgagctcaagtccatcttgtcctcg
ggattctcctgtgtgatgcatgtccacaccgccattgaagaagtcacatttacaaagctg
ctgcaccacttgcaaaagggaaccaacagaaaatccaagaagccaccagcgtttgctaag
cagggcatgaagatcatcgccgagctggagaccgctatgccagtttgtctcgagacatac
gaggactatccgcagctgggcagattcaccctgagagatcagggccagaccattgctatc
ggaaaggttactaagctattgtaa
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