Ogataea parapolymorpha: HPODL_02233
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Entry
HPODL_02233 CDS
T08137
Name
(RefSeq) hypothetical protein
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
opa
Ogataea parapolymorpha
Pathway
opa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HPODL_02233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opa03009
]
HPODL_02233
03016 Transfer RNA biogenesis [BR:
opa03016
]
HPODL_02233
03029 Mitochondrial biogenesis [BR:
opa03029
]
HPODL_02233
Enzymes [BR:
opa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
HPODL_02233
Ribosome biogenesis [BR:
opa03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
HPODL_02233
Transfer RNA biogenesis [BR:
opa03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
HPODL_02233
Mitochondrial biogenesis [BR:
opa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
HPODL_02233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_N
POPLD
POP1_C
Motif
Other DBs
NCBI-GeneID:
25771687
NCBI-ProteinID:
XP_013937330
UniProt:
W1QLP8
LinkDB
All DBs
Position
I:694798..697197
Genome browser
AA seq
799 aa
AA seq
DB search
MADFNQRRTKLYNSRLIRAEVADPAFTAAQDPVTGVSAKLDVEKFVQSREFEIKEFELSK
LRSRYSSATRVFQSLPRSMRRRTASHNVRRVPKRLRTRALREMGLSMKEPDGNETKGVDR
QGRPSKAKHSRGRELYRLRRQEKLLRYAARLKLSGHLVDGERVNVRNVKMRAKLKALRER
IQELSQSAETPLNNVCGSVDWTGINERATIGKVSTIRYISRQRDFKWLPTHVWHAKRAHM
VKRWGWNIAYEPTMKCFRQTSRQSRIKGCIGFDTSFYTTIVLKGDGLGKVVEILTNGKAL
GKKYVQNGRIWEGFVQLDDELLCHSMVWWIKNGKECVLRIHPSVYDRIMDYLLSKRDEIE
IQDSRYSIGSITVTGPQALCSLASIIHPSSEAVASQLFRQLSTLNSSAIPLGTTFSFFAD
DPRLWPRPTKPHTKPSDPLETIIQVQSGAGVEVCAVEALFSVEGRVASYAGQPSLKQLGR
RRTPDLVGRPIPKADSDPSIPIVLVKLQCGFVLLTPWHWVLPFWHQLAHTPHFALGGLKQ
LAQLEFEKGELSFADCAFTRAGFVEGLAKMEELEARWAKRPKSKRVNYDKLDEPGSPFGC
DWRYLQLLRQKLKQVPRVEDYSGTEFTITQERVIKNKQDVFEAIEDQKEKDRLINALGKP
VFTQLPIKLVGLTQQPDTPSSRLSVVAVKFRMVNRGHPADNARIYAIPEESYLRWLEEAG
KKTILGKTMPFGPECPGKEYLIGYATSATFNLAAGKGTGVGLIDAEVAYDLHTKNRHTFI
VRNVASTACYLAEWTLVAV
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcagattttaatcagcgacggacaaaactgtacaattcgcggcttattcgtgcagag
gtcgctgatccggcgtttacagcagcacaggatcctgtcaccggggtcagtgcgaaactg
gacgtggaaaagtttgtccagtctagagaattcgagatcaaagagtttgagctttccaag
ctcagatcgcggtactcctctgcaacaagggtgttccaaagcttaccaaggtccatgcgc
agacggactgcaagccacaatgtgcggagagtgcccaaacgcttgaggacgcgcgcgttg
cgggagatgggtctctcaatgaaggagcccgacgggaacgaaaccaagggcgtggacaga
cagggcaggccgtcaaaggccaaacattcgcgcggaagggagctgtaccggctgcggcgg
caggaaaagcttctgcgctatgccgcacggctcaaactctccggacacctggtggatgga
gagcgtgttaatgtgcgcaacgtcaagatgagagccaagttgaaagcgctgcgcgaaaga
atacaggagctctcacaaagcgcagagacgcctctaaacaatgtctgtggatctgtggac
tggacaggaatcaatgagcgggccactattggcaaagtgtctaccatcaggtacatttct
cggcaacgggatttcaagtggcttccgacccacgtttggcatgcgaaaagagcacatatg
gtgaaacgatggggctggaacattgcatatgagcctaccatgaagtgtttccgccaaacc
agccgtcaaagcaggatcaagggctgcattggtttcgacacttctttttatacaacgatt
gtcttgaaaggagacggattgggcaaggttgtggaaattctgacgaatggaaaagcttta
ggaaaaaagtacgttcaaaacggccggatatgggagggattcgtccagcttgacgatgag
cttctatgccattccatggtctggtggataaaaaatggaaaagagtgcgtgctaagaata
cacccatcagtttatgatcgtataatggactaccttctctccaaaagagacgaaattgaa
attcaggacagcagatactctatcggctcaatcacggtcaccggaccacaggccctgtgc
tcgttggcctccatcatccatccttccagcgaagcggtagccagccagctatttcgtcag
ctatccacgctgaacagctcagctattcctctaggaaccacattcagtttctttgctgat
gatcctcgtctgtggccaagaccaaccaagccccacaccaaaccatcagacccgttggaa
accatcatccaggtccagagcggagccggtgtagaggtgtgtgcagtcgaggcgcttttc
tctgtagagggcagagttgcatcttacgcaggccagccgtccctgaaacagctgggccgg
cgaagaacgccggatctggtaggccggccgatcccgaaggccgactctgatccgagtatc
cctattgtgcttgtgaagttgcagtgcgggtttgttttgctgaccccatggcattgggtg
ctaccgttctggcaccagctggcacacacgccccattttgcacttggcgggctgaaacag
ctagctcagctggagtttgagaagggagagcttagttttgccgattgcgcgttcacgagg
gcaggtttcgtcgagggcctggccaaaatggaagagctggaagcacgctgggccaagcgg
cccaagagcaaacgagtcaactacgacaagctggacgagcctggatcgccgtttggctgt
gactggcgctacttgcagctattgcggcagaaattgaaacaagtgccgcgagtcgaggac
tattcaggcacagaattcacgatcacacaggagagagtaataaagaacaaacaggatgtt
ttcgaggctattgaggaccagaaagaaaaagataggctgattaacgcgctggggaagcca
gttttcacacagctgcccatcaagctggttggcttgacgcagcagcccgacaccccgtcg
tcccgtctgtcagtggtagcagtcaagtttcgcatggtcaataggggccatcctgccgat
aatgcgcggatctatgccattccagaggagagttatttgcgttggctagaggaagctggc
aaaaagacaatattaggcaagacaatgccatttggtcccgaatgtccaggcaaagagtac
ctaattggctacgccacaagcgctacatttaatttggcagctggcaaaggcacaggagtg
ggacttatagacgccgaagtcgcttacgaccttcacaccaagaacagacacacatttatc
gtccgcaacgtggccagcaccgcttgctaccttgcagaatggactcttgtggctgtgtaa
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