Ogataea parapolymorpha: HPODL_02236
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Entry
HPODL_02236 CDS
T08137
Name
(RefSeq) ATP-dependent RNA helicase DBP4
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opa03009
]
HPODL_02236
Enzymes [BR:
opa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HPODL_02236
Ribosome biogenesis [BR:
opa03009
]
Eukaryotic type
90S particles
Helicases
HPODL_02236
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
25771690
NCBI-ProteinID:
XP_013937333
UniProt:
W1QJU9
LinkDB
All DBs
Position
I:complement(702013..704241)
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AA seq
742 aa
AA seq
DB search
MAKVKKKHTREEQKRLAALAAKELEQLKQQIEELPLEQAKSFTKFDDLPLTKNTLRGVKE
SSYVTMTDIQRDSIPLALKGHDILGAAKTGSGKTLAFLIPVIEKLVHENWNEFDGVGALI
ISPTRELAMQIYEVLLKIGKHHSFSAGLVIGGKDYEFEKERIGKMNILIGTPGRLLQHMD
QSATLNLTNLQILVLDEADRILDLGFKKTLDDIISNLPPERQSLLFSATQTKSVQDLARL
SLVNPEYVNASSDTSSTPESLEQSYVVIRLQDKLDILWSFIKSHLDSKILVFVSSSKQVH
FIYEAFRKLQPGISLMKLHGRQKQKARMETTFKFTESRHCCLFATDVVARGLDFPAIDWV
VQLDCPEDVATYIHRVGRSARAGRAGKSLLMLTPSEEEPFVKRLESKKIAPKKLNIRNSK
KKSIRDQIQSLCFKSPDLKYLGQKAFISYVKSVYIQKDKEVFDVKQLPLDEFAKSLGLPG
TPKIKMVAGDEELAKQKQKKNASRQLSLLAKADENGEVEAKKTRTKYDKMFERQNQGVLS
EHYLKLNVDAQTEDDDDFLAVKRKDHELQDLPTLEANTSKRAMKKALSKKLAAKARGSGT
KLVFDDEGKAHPIYELEDEEEFHKEGPAEKLKEEFVNEEKKAMEAADVEDKDIVKRKRRE
KKIRRKELEKMELEQDYSESEPDLEADLEISSDSEDERPAKKPKWFEKHEPKTEREPEVI
EYEQPETLEDLEALTEKLIHGE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggtcaaaaagaagcatacacgggaggagcagaaaaggctagccgctcttgcc
gctaaagagctggagcagttgaagcaacagatcgaagagttgcctcttgagcaggccaaa
tcgttcacaaagtttgatgatctaccgctcactaaaaatacccttcgaggagtgaaggag
agcagttatgtcacaatgactgacattcagcgcgattcgattccccttgccttgaaggga
catgatatactcggtgctgcaaagacggggtcgggcaaaacacttgcttttttgatccca
gtgatcgagaagcttgtgcacgaaaattggaacgagttcgacggagtgggagcattaatt
atttctccaaccagagagcttgccatgcagatttacgaggtgctactgaagattggaaaa
catcacagtttttcagccggactggtgattggaggaaaagattatgaatttgagaaggaa
agaattggcaagatgaatatcttgataggtacccctggacgtctattgcaacacatggac
cagtctgccacgcttaatcttactaatttacaaattttggttcttgacgaggccgacaga
attctagatcttggattcaagaagacgctggacgacattattagcaatctgccaccagaa
cgccagtcccttctattttccgctacacagaccaagtcagtgcaggatttggctcgactt
tctcttgtgaacccagaatacgtgaacgcaagctccgacacgagctccactcccgaatca
ctagagcaatcctacgtggtgatacggcttcaagacaagctggatattctatggagtttt
atcaagtcgcaccttgatagcaaaattctggtgtttgtttcgtcttcaaaacaagtgcat
ttcatctacgaggctttccggaagctgcaaccgggaatttcgctcatgaagctgcatgga
cggcagaagcaaaaggccagaatggagaccacatttaagttcacagaaagccgccattgc
tgtctgtttgccacggacgtggttgcgcgtggactcgactttcctgccatcgactgggtg
gtccagctggactgtcccgaagacgtggctacatacatacatcgtgttggccggtcggcg
agggcaggtcgtgccggaaagtccctgttgatgctgactcccagcgaggaagaacctttc
gtgaagaggctagaaagcaagaagatcgctccaaagaagctcaacatccgcaattccaag
aaaaaaagtatccgcgaccagatccaatctctctgcttcaaaagtccggatctgaaatat
ttgggccaaaaggcttttatttcatatgtcaaatctgtgtacatacagaaggacaaggag
gtgtttgacgtgaagcagcttcctctggacgagtttgccaagtctctgggattgcctggg
acgccgaaaattaagatggttgcaggggacgaggaactggctaaacagaagcagaaaaag
aacgcatcgcgtcagctcagcctactggccaaagcggacgagaacggtgaggtggaagcc
aagaaaacaagaacgaaatacgacaagatgtttgagcggcagaaccagggtgttctttcg
gaacactatctcaaactgaacgtggatgcacaaacagaggacgatgatgactttttggca
gtgaaacgaaaggaccacgaactgcaggatctgcctactttggaggcgaacacgtcgaaa
agggccatgaaaaaggcattgtcgaagaagctggctgccaaggctcgtggatcgggcaca
aagctggtgtttgacgacgagggaaaagcgcatccgatctacgagctggaggacgaggag
gagttccataaggaaggtccagccgagaagttgaaggaggagtttgtgaacgaggagaaa
aaggcaatggaggctgccgacgtggaggacaaggatatagtgaagagaaaacggagagag
aaaaaaatcagaagaaaagagctggagaaaatggagctggagcaagattacagcgagagt
gagcccgacttggaggcagatctggagatttcgagcgatagtgaggatgaacggccggca
aagaagccaaagtggttcgagaagcacgagccaaagacagagagggagccggaagtgata
gaatacgaacagccagagaccttggaggatctggaggcattgacagagaaactgattcac
ggagaataa
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