KEGG   Ogataea parapolymorpha: HPODL_02258
Entry
HPODL_02258       CDS       T08137                                 
Name
(RefSeq) NAN1 U3 snoRNP protein
  KO
K14552  NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
opa  Ogataea parapolymorpha
Pathway
opa03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:opa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    HPODL_02258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:opa03009]
    HPODL_02258
Ribosome biogenesis [BR:opa03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    HPODL_02258
SSDB
Motif
Pfam: Beta-prop_WDR75_1st Beta-prop_WDR75_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40 WDR55 WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_SPT8 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st EIF3I eIF2A Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 25771712
NCBI-ProteinID: XP_013937356
UniProt: W1QKV6
LinkDB
Position
I:734900..737260
AA seq 786 aa
MVLSDWNLNFGAGGRLLGRAQLVSADSKFAIVPFKSQIKVYSLATRQSVRSIRLDLDLSL
VVDAAFSTQDPNLLYLFTRTNTMVVVNWREKLASPVVATYTLQLPAEIVRFVRFGASENE
FYFIIGKSTTKNQPHSRTLLKSTIDSQTQEISTLKNVVLFAMSVDRSTLAYLTNKNQLYF
QSGDGPLEMIQFAYKTPITSLAVSNAQTPMIALGTSSGIIQLIYVSDNTKPQRLLKWHIG
QVNCVEFSTDGTYLLSGGQEKVLVFWHLESDNQQFLPRLNGEIVDIELSASTEELYGVSL
LLNGSDREFLVLSAVDLTSRLNVNGVRPRFVTDVETIEKDRRRLAKNSVVLEEDNLTKIK
HDFSSHFEVHPVSSHCYFPYGAHLQSYDFVRNEQISVITAAPTIQAGKVRSETSIQDPEI
EQLAFSHDGKWMCTFDKLQPPEIDNLLSRNDVQYALKFWNYVDGKDRGGWSLSTKIIDPH
GPGVDVVAVAPAPQSYNDGLAFVTADVKGGLRLWRPRVPKEIYQKVGKDKKLQQTAWTLR
KVRNGNERTDVQSISICWSPDASVIAIGQEVSISLIDVNTFEETPVQIPSIAGSRVRCLN
IIDKYLVILARDRLVSFDLLTFQTTDLAVKVHTQPGSRNLLAVDQNRGVFCVCVNYYSKT
YNLRSRIFVFEPAKLQPLYVSDHDTGISSVRFASGMSSFVIVDTDSRIGILGAGVSSLQE
QRELDRAYELSTLLSNAKQMASIRKTESEAENERKVLNSQIFEPILDNLEGLPLEALFDR
VMKIIV
NT seq 2361 nt   +upstreamnt  +downstreamnt
atggtgctctccgactggaaccttaattttggtgctggcggccgtcttctcgggcgtgcg
cagctcgtgtccgccgattccaagtttgccattgttcccttcaagtcacagatcaaagtt
tactccttggccacccgtcagtcagtgcgtagcattagactcgatctcgatctttctctg
gtggtggatgctgcgttcagcacacaagatccaaaccttttgtacttgtttacgaggact
aacactatggttgttgtcaactggagagaaaagctggcttcgccggtggttgccacctat
accttacagctacctgccgaaatcgtgagatttgtgcgatttggagcctctgagaacgag
ttctatttcatcattgggaaatctaccaccaaaaatcaaccacacagccgcactttgttg
aaatccactattgactctcaaactcaagagatatcgactctaaaaaacgtggtgcttttt
gccatgtctgttgatagaagcacgcttgcatacctcacaaataaaaatcagttgtatttc
cagtccggagacggtcccctggagatgattcaatttgcttacaagacgcctattacctcg
ttggccgtctctaatgcacagaccccgatgatcgctctgggaacctcgtcaggtattatc
cagcttatttacgtttcagataacaccaaaccccaacggctgctcaagtggcacattggc
caggtcaactgtgttgaattcagtacagacggcacttatctgctatctggaggtcaagaa
aaagttcttgtcttttggcacctggaatcggataaccagcagttccttcctcgtttgaat
ggagaaattgtggacatcgagctttctgcctcaacagaagaattgtacggtgtcagttta
cttttgaacggctccgatagagaatttttggttttgagtgcggtggatttgacttccagg
ttgaacgtcaatggggtacgtccaaggtttgtaaccgatgttgagaccattgaaaaagac
cgtcggcgactggcaaagaacagcgtcgtgttggaagaggataatttgacgaaaatcaaa
cacgacttctcgtctcactttgaggtccatcctgtttccagccattgctacttcccatat
ggagcacatttacagtcgtacgattttgtcaggaatgagcaaatctccgtgatcactgcc
gcaccaacaatccaggcaggtaaagtccggagcgagacatcaattcaggatccagaaatt
gagcagcttgcattcagtcacgacggaaaatggatgtgcacattcgacaaactccagcct
ccagaaattgacaatcttctttctcgcaacgacgtccaatacgccctgaaattctggaac
tatgtggatggtaaagatcgaggtggctggtcattgtcgacaaaaatcatcgatcctcat
ggaccaggagtcgatgtggtggccgtggctccagccccacaatcttacaacgatggtctt
gctttcgtaactgccgatgtcaagggtggcctgcgtctctggagaccacgggtgccaaag
gaaatataccaaaaagttggaaaggacaagaaactacaacaaaccgcatggactctacgt
aaagtacgcaacggaaatgagcgcactgatgtccaaagtattagcatctgctggtcccca
gacgcatcggtgattgctattggccaggaggtgagcattagcctcattgacgtgaacacg
tttgaagagacaccagttcaaatcccatctatcgctggctccagggtgcggtgtctgaac
attatagataaatatctggtgatacttgccagagacagattggtttcatttgatctgctc
actttccagaccacagaccttgccgtgaaagtccacacacagcccggaagtcgcaatctg
ctggctgttgaccaaaacagaggagttttctgtgtttgcgtgaattattactcaaagacc
tataatttgagatcacgaatttttgtgtttgagccagcaaaattacaaccgctttacgtt
tccgaccacgacaccggtatatctagtgtgaggtttgcctctggaatgtcgtcttttgtc
atcgttgatacggactcgcgcataggaattttgggagcaggagtttcttctttgcaagag
cagagagagcttgaccgcgcgtacgaactcagcacccttctcagcaacgccaaacaaatg
gcttccattaggaaaaccgagtcggaagcggagaacgagagaaaagtgcttaactcgcaa
attttcgagccgatcctcgataatttggagggacttcctctcgaggccttatttgataga
gtgatgaaaataattgtgtaa

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