Ogataea parapolymorpha: HPODL_02422
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Entry
HPODL_02422 CDS
T08137
Name
(RefSeq) protein PUF6
KO
K14844
pumilio homology domain family member 6
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opa03019
]
HPODL_02422
03009 Ribosome biogenesis [BR:
opa03009
]
HPODL_02422
Messenger RNA biogenesis [BR:
opa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
HPODL_02422
Ribosome biogenesis [BR:
opa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
HPODL_02422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
PUF
Motif
Other DBs
NCBI-GeneID:
25771875
NCBI-ProteinID:
XP_013932201
UniProt:
W1Q7C1
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All DBs
Position
VII:complement(<50443..>52281)
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AA seq
612 aa
AA seq
DB search
MVKKRVAEETVVKVKKAKIDPEHSEDESEDQLDELDSHSDNEQSDESSESINNKENGEDN
RPSRQEQKKLLSERKLKRKSGTQVENIKRLWEKLRVKNPPMPKEIRDKLCDETWELSKDV
IGDLVLKHDASRVVQTLVKYCSKERREIITRALKGNFYNLATSAYGKYLLIKLLHYGSKD
SRELILSELHGKLRKLIRHREGAYVVEDLYVLYATAKQKSQMIREFWGSEYAVFRDPNDT
RTIKDVCADSAEKRALIANNLITTIRGSVEKGSTGFQILHAVMREYVQIFENEEVRAFIE
LLQDQVAELVHTPEGCEVACTLVAKSNAKERKAILKGLKNHAEALATNEHGQFVLQVIFM
TVDDTVLVNRTFSGALKDSFDRIMVGKFSRRPFVYLLNGLDRSYFSPLVLKDVEKYTEMA
AETSKKPQDQRRKELLKNFLPIFYETFLHKPVILHENLGAQFILELILNNEFPQEAQEYR
QQALDIIIGEMKEELGEEHLLNKPFTPRLVKTLIQGGKWNNKEKKVDLVDGIGIGMEFAS
SFVERVFENGENEDVLKSWINDNQGCFVLVALFERLKDTKKHSFPKKLKKMDKLIKKQDD
SNKGAQLLLKVF
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagaaaagagttgcagaggagactgttgtcaaggtgaagaaggccaaaatcgat
ccagaacattccgaagatgagtctgaagatcagttggatgaactggattcccacagcgac
aacgaacaaagcgacgaatcaagcgaatccatcaacaataaagaaaatggtgaagataat
agaccatccagacaggaacagaaaaagcttttgtcagagagaaaactaaagcgtaagtct
ggtactcaagtggagaacatcaaacgtctttgggagaaattgagggtgaagaaccctcca
atgccaaaggaaatccgtgacaagctctgcgacgagacatgggagctgtccaaggatgtg
attggcgatctggttctgaaacacgatgcctcacgtgtcgtccagactcttgtgaagtat
tgttcgaaagagcgtcgtgagatcattacgagagctcttaaaggcaatttttacaatctt
gctacctctgcctacggaaagtatctgttgataaagttgctgcactatggctccaaagat
tcaagggagcttattctgtctgagcttcacggaaagcttcgcaaattgattcgtcataga
gaaggtgcctacgtcgtggaggacctgtatgtgctctatgctaccgcgaaacagaaatct
caaatgattcgggaattctggggctcggagtatgctgtattccgtgacccgaacgacacg
cgtaccatcaaggacgtgtgtgctgactccgctgagaaaagagccctgattgccaacaat
cttatcacaaccatccgtggatctgtggagaaagggtccaccggtttccagattctccat
gctgtcatgcgcgagtatgtgcagattttcgaaaacgaagaagtgcgcgcgtttattgag
ctgttacaggatcaggtcgcggagctggtgcacactcctgaaggctgcgaggtcgcttgt
acgctggttgctaagtctaatgctaaggagagaaaggctattttgaaaggcttgaaaaac
catgctgaggcgctggccaccaacgaacacggtcagtttgtgctgcaagtcattttcatg
accgttgatgatactgttcttgttaacagaactttttcgggcgctttgaaagacagcttt
gacagaatcatggttggcaagttttccagaagaccgtttgtgtacttgctcaacggactt
gaccgctcttatttctcccctttggtcctgaaggacgttgagaagtatacagaaatggct
gctgagacgtccaagaagccacaggaccaacgtcgtaaggaactactcaagaacttcctt
cctattttctacgagacatttttgcacaagccggtcatcttgcacgaaaatttgggtgct
cagtttattctggagcttattctgaacaacgagttccctcaggaggcacaggaatataga
cagcaagctctggacataataattggcgagatgaaggaggagcttggggaagagcatcta
ttgaacaaaccgttcactcctagacttgtgaagacgcttattcagggtgggaaatggaac
aacaaggagaagaaagttgacctggtggatggtattggaattggtatggaattcgcgtcc
agctttgtcgagagagtgtttgagaacggagaaaacgaagacgttcttaaatcatggatc
aacgacaatcagggttgttttgttcttgttgctctgtttgaacgtctgaaggacaccaaa
aagcactcgttcccaaagaaactaaagaagatggacaagctgatcaagaaacaggacgac
tccaacaagggagcacagctgctgctcaaggtgttctga
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