KEGG   Ogataea parapolymorpha: HPODL_02497
Entry
HPODL_02497       CDS       T08137                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
opa  Ogataea parapolymorpha
Pathway
opa03030  DNA replication
opa03410  Base excision repair
opa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:opa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HPODL_02497
   03410 Base excision repair
    HPODL_02497
   03420 Nucleotide excision repair
    HPODL_02497
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:opa03032]
    HPODL_02497
   03400 DNA repair and recombination proteins [BR:opa03400]
    HPODL_02497
Enzymes [BR:opa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HPODL_02497
DNA replication proteins [BR:opa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    HPODL_02497
DNA repair and recombination proteins [BR:opa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      HPODL_02497
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE DNA_pol_B zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 25771950
NCBI-ProteinID: XP_013932279
UniProt: W1Q6U0
LinkDB
Position
VII:complement(188342..194890)
AA seq 2182 aa
MSVTTMRSHNSVRFVKNERGATRTGENYTRNNEARVRLRHEAVQEVDRIDSVFGFDRYSS
GAKRVGWLVNMHPTTLPTTENIAGCSGVDYYFLDEEGGSFKASVQYDPYFLLMVQTDRAT
EVEEYLRKFLEGTLKKLSWVEKEDLALTNHLVGLKRQLLQLSFHNVSDLLEARRQLQPII
QQNKSTKNSKDIYQSVNMNYNTFMKHHDGHEEAERKVGNITDLIEDIREYDVPYHVRVSI
DCNIRVGKWYTVEADQGKVRLEERADKLAFADPVVLAFDIETTKAPLKFPDSSVDQIMMI
SYMIDGEGYLITNREIISEDIEDFEYTPKPEYPGYFTIFNEPNERHVIQRFFEHVRDTRP
TVIATFNGDFFDWPFVEARAAYHDIDMYKEIGFAKDSEGEYKSTYCVHMDCFRWVKRDSY
LPQGSQGLKAVTTVKLGYNPTELDPELMTPYAYEKPQLLAEYSVSDAVATYYLYYKYVHP
FIFSLCTIIPLNPDEVLRKGTGTLCEMLLMVQAYQNGILLPNKHTDPLERFYDGHLLESE
TYVGGHVESLEAGVFRADLATDFNVDPAAVDEILNDLDNALKFSITVEEKKKLEDVTNYN
EVCAEIRAKLIELKTNNKRTETPLIYHVDVASMYPNIMTTNRLQPDSMKTEKDCASCDFN
RPGKTCDRRLPWAWRGEFYPAEANEYNMIKNALKNEQFAPKHPGLPRRTFEELSYTEQVG
HIKKRVSDYSRKVYHRIKATETVEREAIICQRENPFYVNTVRDFRDRRYEFKGLAKVWKG
KVAQIGRDDKNAVDEAKKMVVLYDSLQLAHKVILNSFYGYVMRKGSRWYSMEMAGVTCLT
GATIIQMARSLVERLGRPLELDTDGIWCILPSSFPEDFKFTLKNGKSFTVSYPCSMLNYL
VHQRFTNHQYQMLVDPVRLKYETISDNSIFFEVDGPYKAMVLPTSKEEGKGLKKRYAVFN
FDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEGNSLEECYQAVANIANRWLDVLDSR
GQMLEDEDLIELICENRSMSKTLEEYGGQKSTSITTARRLGEFLGEEMVKDKGLACKYVI
ADRPIDAPITERAIPTAIFSSDIAVKRKYLRRWLVDPSLEDLDPRSIIDWGYYKERLASV
IQKIITIPAALQGVSNPVPRVSHPDWLQKRINTKEDKMKQSSLSAFLKKGVMSDVTNQVQ
DIEDLGTGAARPKVGKVTCRKRKLARETLEESQQQLANQPCPDPLTDYAGFLQYQKIKWE
VQAKERERRKRLFGETAQLGSRMSVANMVRKRAENYAESTWQVLQYCESTDNPGDLKAYV
LINGKIHTLTLHVPKKLYLDFKSEPFPDTVLESCEVTRAAELLPSGQKSANLFKMVMSHD
VYSREISKTNGLLNSPHVAGIYETQIQSTERAIIELGSCVKFDNTRPGSLGKSLEKGFDV
KLLRPVAAETYLSDLTTGVLYLLHVSSNSYEIFTLFNPADSSAHVYVLKPTATAQQLPAN
VDSLYEEIFASKKDTLPSDLINYQDQMKFETQYFTDAVKLYKKLNSKLLTLDEHSASKSL
LVVQSPYSSKIARHLAATAQFPCVRMGAGQIHINSLSWHSLIMKRIINHYLSVAGWLQKI
ISLARYSNIPLCNLEIDNLGYMIDIEYARKLSQANIVLWWSPTPNPDLGGVEKDTFAVDE
SFEFPVINQSEVYESVCLELELKNLTINTVLTSSLINEAEGVFSSTDAAAEGAFAEDSFS
GPALVVLRSLVRTWWDDAIKNNSEADSMVHGFVSWCQNPASFLYDSSLHYHVHNLTKKSF
IQLLGEFKKMGSAVVFADRNRVIVETSKTAVENSYAYSQYILTSVRASPLFNYLDLQVVK
YWDLLVWMDKYNYMGRFCHQVQEAEVQKLEAVSNWQLKSYLPPILHSEFEEWTWLILDSL
IKHRDGRFKNLSQSTQLTPDRKAALKKIKDQKDEDALDTVANGVCELFRAPLLKRLHTLI
KKQNEVGLDPGIMEQYQFPVLPGSHLEMSNPTLELTKYLCHILGLSKKRNIEVRLLRKEI
LSLFEIKEFSDEGVFKNPAASLVLPHVICSYCNHIKDVDVCRDEPHVLWHCEGCNKPYNK
LLLEERLISELNRLLFRFLTQDLKCAKCGKTKDREIMAHCSCSGTWTQTVSIKDVVAQLR
LYRNVALAHDLKLLLEIAEETV
NT seq 6549 nt   +upstreamnt  +downstreamnt
atgtcggtcaccaccatgagatctcacaattctgtgagattcgtgaagaacgagcgcggc
gcgacgcgcacaggcgagaactacacccgaaataacgaggctcgcgtgcgtctacgccac
gaggccgtccaggaggtcgacaggatcgactccgtctttggctttgatcggtacagttct
ggcgcaaaacgggttgggtggctcgtcaacatgcatccgacaacgctgccgacgacagag
aacatagctggctgctcaggagtcgactactactttctggacgaggaagggggctcgttc
aaggcgagcgtccagtacgacccgtatttcctgctcatggtccagacagaccgtgccaca
gaggtcgaggagtatttgcggaagtttctggaaggcactttgaagaagctgtcgtgggtg
gagaaggaagatcttgctctgacgaaccatctggtcgggctgaagcggcagctgctgcag
ctgagtttccacaacgtctcggaccttttggaggccagacgacagctacagcccattatt
cagcaaaacaagtccaccaaaaatagcaaggacatataccagtcggtgaacatgaactac
aacacgtttatgaagcaccacgacggtcacgaggaggccgagcgcaaggtcggcaacatc
accgatttaattgaggatatccgcgagtacgacgtgccgtatcacgtgcgcgtgtcgatc
gactgcaacatccgcgtgggcaagtggtacacggtggaggcggaccagggaaaggtgaga
ctcgaagaacgagccgacaagcttgcttttgcagaccctgtggtgctggcgttcgatatc
gagaccaccaaggcgccgcttaagttccccgacagctctgtggaccagatcatgatgatt
tcgtacatgattgacggcgagggatatctgatcaccaacagagagatcattagcgaggat
attgaggatttcgagtacaccccgaaaccagagtatcctggctatttcacaatttttaac
gagccaaatgagcggcacgtgatccagagatttttcgagcacgtgagagacacgcggccg
accgtgattgccacgttcaacggtgacttcttcgactggcctttcgtcgaggcacgtgcc
gcgtaccacgacatcgacatgtacaaggagatcgggtttgccaaggacagcgagggcgag
tacaagagcacctattgcgtccatatggactgtttccggtgggtcaagcgtgactcgtat
ctgccgcagggatcgcagggcttgaaggccgtgacgacggtgaaactgggctacaacccg
accgaactcgacccagagctcatgacgccgtatgcgtacgaaaaaccgcagctgcttgcc
gagtactctgtctccgacgcggtggccacatattatctttactacaaatacgtgcacccc
ttcattttctcgctgtgcacgatcatcccgctaaacccggacgaggtgctgcgcaagggc
accggcacgctatgtgagatgctgctgatggtgcaggcgtaccaaaacgggattttgcta
ccaaacaagcacaccgacccgcttgaacggttctacgacggccatctgctcgagtcggag
acgtatgtggggggccatgttgagtcgctggaggcgggagtcttccgtgcggacctggcg
accgacttcaatgtcgacccggccgccgtggacgaaatattgaacgacctcgataacgct
ctcaaattctccatcaccgtggaggaaaaaaagaagcttgaggatgtgacgaactacaac
gaggtgtgcgcagaaattcgcgccaagttgatagagctcaagaccaacaacaagcgcaca
gagacgccgctgatctaccacgtcgacgtcgcgtcgatgtacccgaacatcatgacgaca
aaccggttgcaaccggactcaatgaaaacggaaaaagactgtgcttcgtgcgatttcaac
cggccaggaaagacgtgcgaccgccggctgccgtgggcctggcgtggcgagttctatcct
gccgaggccaacgagtacaacatgatcaaaaacgcactcaaaaacgagcagtttgccccc
aaacacccggggctacctcggcgcacgttcgaggagctcagctacacggagcaggtcggc
cacatcaagaaacgcgtctcggactactcccggaaagtgtatcaccgcatcaaggccacc
gagaccgtcgagcgcgaggccatcatctgccagcgcgaaaacccattctacgtcaacacg
gtgcgcgactttagagacagaaggtacgaattcaaaggcctggcaaaggtgtggaagggc
aaggtggcccagatcggcagggacgacaagaacgccgtcgacgaggccaaaaaaatggtc
gttctgtacgactcgctgcagctcgcacacaaggtcattctcaactcgttctatggctac
gtcatgcgcaagggctcgcgctggtactcgatggagatggccggtgtcacgtgtctcacg
ggggccacaatcatccagatggcccggtcgttggtggagcggctggggcggccgttggag
ctcgacacggacggaatctggtgtatcttgccgtcgagtttccccgaagacttcaagttc
acgctgaaaaacggcaaatcgttcaccgtgtcgtacccgtgctcgatgctcaactacctc
gtgcaccagcggttcaccaaccatcagtaccagatgctggtggaccccgtgcggctcaaa
tacgagacgatctcggacaattcgattttcttcgaggtcgacggcccgtacaaggcgatg
gtgttgccgacgtcgaaggaggagggcaagggcctgaagaagcggtacgcggtgttcaat
ttcgacggttcattggcagagctgaagggatttgagctgaaacgacgcggtgagctgcag
ctgatcaaaaacttccagtcggacattttcaagctgtttctggagggcaactcgctcgag
gaatgctaccaggcggtggccaacatcgccaaccggtggctcgatgtgctggatagccgc
ggccagatgctggaagacgaagacctgatcgagctgatttgcgagaaccgcagcatgtcg
aagacgctggaggagtacggtggccagaagtcgacgtcgatcacgacagcaagacgtctc
ggcgagtttttgggcgaagagatggttaaggacaaaggtctggcgtgcaagtatgtgatc
gccgacaggccgatcgacgcgccgattactgagagagcgattcccacggccattttctcg
tccgacatcgctgtgaaacgcaagtatttgcgccgctggctggtcgacccgtcgctcgag
gacctcgacccgcgctccatcatcgactggggctactacaaagagcggctcgcgtcggtg
atccagaaaatcatcacgatcccggctgcgttgcagggcgtcagcaaccctgtgccccgt
gtgtcgcacccggattggctgcagaaacgcatcaacacgaaggaggataagatgaaacag
tcgtctttgagcgcgtttctcaaaaagggtgttatgtccgacgtcaccaaccaggtccag
gatatcgaggatcttggcactggcgcggccagacctaaagttggcaaggtcacgtgccgc
aaacggaaattggctcgagaaacgttggaggagtcgcagcaacagctcgccaaccagccg
tgtccggacccgctgacggactatgctggcttcctgcagtaccagaagatcaaatgggag
gtgcaggccaaggagcgcgagcgcaggaagcggttgttcggcgagacggcgcagcttggt
agccggatgtctgtggcgaacatggtgcggaaacgggccgaaaactacgccgagtccacg
tggcaggtgttgcagtactgcgagagcacagacaatccgggtgatctcaaggcgtacgtg
ctgatcaacggcaaaatacacacgctcacgctgcacgttccaaaaaagctgtatctggac
ttcaagtcagaacctttcccggatactgttctggagagctgcgaggtcacgcgggcagca
gagctgctcccgagcggccagaaaagcgccaatctgttcaagatggtaatgtctcacgac
gtgtacagccgcgagatctccaagaccaatgggctgctgaacagtccgcacgttgccggg
atttacgagacccagatccagagtaccgagcgcgcgatcatcgagcttggcagctgcgtg
aagtttgataacacgaggccgggatcactgggcaaatcgctagaaaaaggctttgatgtc
aagctgctccgtcccgtggctgcagaaacgtacctttccgacttgaccactggcgtgctg
tacttactgcacgtgtcgtccaattcgtacgaaatattcacgctgttcaatcctgcggac
tcgagcgctcacgtgtatgtgctcaagccgaccgccacggcccagcagctgcctgcaaat
gtcgattctctctacgaagagatttttgctagcaagaaggacacgctgccatcggatttg
attaattaccaggaccaaatgaagttcgagacgcagtacttcacagacgcagtcaagctg
tacaagaaactcaactccaagctgctcacgctcgacgaacacagtgcgtccaagtcattg
ctcgtggtgcagtctccatacagctccaagatcgccagacaccttgctgcgaccgcacaa
ttcccctgtgtgcggatgggcgccggccagatccacatcaactcgctctcgtggcactcg
ctgataatgaagcgtattatcaaccactacctatcggtggccggatggttgcagaaaatc
atctcgctcgccagatacagcaacattccgttgtgcaacctcgaaatcgacaatctcggc
tatatgattgacatcgagtacgcacggaagctgtcgcaggccaacattgtgctgtggtgg
tcgccgactccgaacccggatctgggcggtgtggagaaggacacctttgccgtggacgag
tcgttcgagttcccggtgatcaatcagtccgaggtgtacgagagcgtgtgtctggagctg
gagctgaaaaatctcaccatcaacacggttttgacgtcgtcgctgattaatgaggccgaa
ggcgttttcagctcgacagacgcggctgcagagggagcgtttgccgaggactcgttttct
gggccggcgctcgtcgtgctgcgcagtctggtgcgcacctggtgggacgacgccattaag
aataattccgaggcagactccatggtgcacggctttgtgtcgtggtgccagaacccggcc
tcctttttgtacgactcgtcgctgcattatcacgtgcacaacctgacgaaaaagtcgttc
atccagctgctcggtgaattcaagaagatgggctcggcagtcgtctttgcagacagaaat
agagtcattgtcgagacatcgaaaacggcggtcgagaactcgtacgcatacagccagtac
attctcacctcggtcagagcgagcccgcttttcaactatctggacctccaggtcgttaag
tactgggacctacttgtctggatggacaagtacaactacatgggccggttctgccaccag
gtgcaggaggcagaggtgcaaaaactggaggcggtttcgaactggcagttgaaaagctat
ctaccaccgatcctgcacagcgagtttgaagagtggacgtggctcattctcgactcgctc
atcaagcacagagacggccggttcaaaaatctgtcgcagagcacccaactgacaccagac
agaaaagccgctcttaaaaaaattaaagaccaaaaagacgaagacgcacttgataccgtc
gccaacggcgtgtgcgagctgttcagggccccgctgctgaaacggctgcacactctcatc
aagaaacaaaatgaggttggcctggacccgggaatcatggagcagtaccagttccctgtg
ctgcccggctcgcatctcgaaatgtcaaatccgacgctcgagctcaccaaatacctgtgc
catattttgggcctgtccaaaaaacgcaacatcgaggtccgtctgctgcgtaaggagatc
ctgtcgctgtttgagatcaaggaattcagcgacgaaggtgtcttcaaaaacccggcagcc
agcctcgtgctcccgcacgtgatctgcagctactgcaaccacatcaaggacgtcgacgtt
tgcagagacgagccgcacgtcctgtggcactgcgaggggtgcaacaagccttacaacaag
ctgctgctcgaggagcggctcatctcggaactcaacagattgctcttccggttcctgacc
caagaccttaaatgtgccaagtgcggaaaaactaaagacagagagattatggcgcattgc
tcgtgctccggaacgtggacacaaaccgtcagcattaaggacgttgtcgcccaactcagg
ctgtaccggaacgtggcgttggcacacgacctcaagttgctactggagattgcagaggaa
actgtataa

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