KEGG   Ogataea parapolymorpha: HPODL_02564
Entry
HPODL_02564       CDS       T08137                                 
Name
(RefSeq) hypothetical protein
  KO
K14408  cleavage stimulation factor subunit 3
Organism
opa  Ogataea parapolymorpha
Pathway
opa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:opa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    HPODL_02564
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:opa03019]
    HPODL_02564
Messenger RNA biogenesis [BR:opa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     HPODL_02564
SSDB
Motif
Pfam: Suf HAT_PRP39_N HAT_PRP39_C HAT_Syf1_CNRKL1_N TPR_14 TPR_15 RNPP_C DUF6845
Other DBs
NCBI-GeneID: 25772016
NCBI-ProteinID: XP_013932349
UniProt: W1Q6W8
LinkDB
Position
VII:307897..309663
AA seq 588 aa
MDTKRRKLDDPLTIESLAESLDRARWLKLVHGSPTTETFEAYLKVFFNDGEVWKEYIEHE
MAKNDDAKVEALFSRCLTKVFDVELWKVYLKYVRKVNDIVTGGEQARAVVMKAYDFAIDN
VGLDFINGQEIWDEYFRFLNEWNPVSSIEQSSKNAHLRSLYRKLIGTPLRQLDQNWRKYL
DFENETDQANARRHINEKSQEYMKLRPLNQELINLTAYLRPSDEAKNSRNQLEHWKRWIA
WERSNKLNLPQESMDKRVNFVYRLSTQYLRFQPEVWYNYAVYLFASDKSEQGMEVLGHAL
VLNPESISLVLLVSGQYERSSEIEKVKESWNRLIDRLTKHYDTEENEKTKATLGQCITCV
YSLLMKACRRAAGMKEARSIFSVARKFKGVTWHIFVDYAMMEHQNSDLKIALRCFELAMK
YFGQDYAFVETYLNFLLSMNDLGNSKKLLEQSIENFKDKRSTLEKVYRRFYRIELEFGDT
DSIRALEKRYREAFPDSNEFQFLSKSFGEFNAIKLLDEYTLTGKEEAVDKVAEIKLKEIE
IPEIEPFAVRDEIYNLLRYLPKPEYYDDKPPVFDVKKSVQFFRNIKLT
NT seq 1767 nt   +upstreamnt  +downstreamnt
atggacaccaagagacggaaattggacgatcccctgaccatcgagtctcttgcagagtct
cttgatagagcccgctggctgaagcttgttcatggttcgccaacaacagagacgttcgag
gcgtatctcaaggtgttcttcaacgacggtgaggtttggaaagaatacatcgaacacgaa
atggccaagaacgacgacgccaaagtggaggcgttattttccagatgtctcaccaaggtc
tttgatgttgagctgtggaaagtgtacctgaagtatgtgaggaaagtgaacgatatcgtt
actggaggagaacaggctagggcagtggtaatgaaagcctatgactttgccattgacaac
gtggggttggacttcatcaacggccaggaaatatgggacgagtatttccgttttctgaac
gagtggaaccccgtttcgagcatcgaacagtcatccaaaaatgcgcaccttagatcttta
tatagaaagctcatcggcactcctcttcgccaactagaccaaaattggagaaagtacctg
gactttgaaaacgaaacggaccaggcgaacgccaggcgccacatcaacgagaaatcgcaa
gaatacatgaagttgcgtcctttgaatcaagaacttataaatctcactgcttatttgcgt
ccatcggacgaggcgaaaaatagccgcaaccaacttgaacactggaaacgttggattgcg
tgggagcgcagcaacaagctcaacttacctcaagaatcaatggacaagagagtcaacttc
gtctacagactgtctacccagtatctgcgattccagccagaagtgtggtacaactacgct
gtgtacttgtttgctagcgacaaatctgagcagggtatggaggtgctaggccacgccttg
gttctgaacccagaaagtataagtttagtgcttttggtctctggccagtacgaacgctcc
agcgagattgaaaaagtcaaagagtcctggaatagacttattgataggctgacaaaacac
tatgacaccgaagaaaatgagaaaacaaaggcaacacttggacagtgcatcacgtgtgtg
tattcgttgctcatgaaggcatgtcgcagagcagcaggcatgaaggaagcgcgtagcatt
ttttctgttgcacgaaaattcaaaggtgtcacatggcacatttttgtggactacgcaatg
atggagcaccaaaatagcgatttgaagattgccctacggtgttttgagcttgccatgaag
tattttggacaggactatgcttttgttgagacgtacttaaactttttgctttcaatgaac
gatctgggcaactccaagaaactgctagaacagtccatcgagaatttcaaagacaaacgc
tcaactttggagaaagtgtaccggcgtttttatcggattgaactggaatttggagacacc
gattcgattcgcgcgctcgagaaaaggtatagagaagctttccctgacagcaacgagttc
caatttttgtcaaaatcttttggtgaattcaatgcgatcaagctgctggacgagtacaca
ttgacaggaaaagaagaggcggtcgacaaggttgccgaaattaaattgaaggagattgaa
attcctgaaattgagccgttcgctgtgcgagatgagatctacaacctactcagatacttg
ccgaagccagaatactacgacgataaaccgcccgtgttcgacgtgaaaaagagcgtgcaa
tttttcagaaacataaaattgacataa

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