Ogataea parapolymorpha: HPODL_02626 Help Entry HPODL_02626       CDS       T08137                                  Name (RefSeq) ATP-dependent helicase NAM7   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism opa  Ogataea parapolymorpha Pathway opa03013   Nucleocytoplasmic transport opa03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:opa00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     HPODL_02626    03015 mRNA surveillance pathway     HPODL_02626  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:opa03019]     HPODL_02626 Enzymes [BR:opa01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      HPODL_02626     5.6.2.5  RNA 5'-3' helicase      HPODL_02626 Messenger RNA biogenesis [BR:opa03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      HPODL_02626    mRNA cycle factors     Common to processing body (P body) and stress granule      HPODL_02626 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII SLFN-g3_helicase UvrD-helicase DEAD NPHP3_N Helicase_RecD AAA_22 nSTAND3 AAA_16 PhoH AAA_10 T2SSE Queuosine_synth ATPase Motif Other DBs NCBI-GeneID:  25772078 NCBI-ProteinID:  XP_013932413 UniProt:  W1Q6Y2 LinkDB All DBs Position VII:complement(424215..426944) Genome browser AA seq 909 aa AA seqDB search MSETFGDSNSMTKSPDACAYCGISEPDSLVKCNTCEKWFCNGKTSGAGSHIITHTVLSKH QSLSLHPDSELGDTMLECYNCGNRNIFVLGFVSAKTDSVVVILCRLPCAQSKNVEWNTAN WQSLIEDRALLPWVAKPPSEEEKLEAQPITSLQITKLETKWKQDKDATLGDMEEAEMEEE LEPILMRYSDAFQYQRSFAPLVQYEANYDKQLKQSQSLERLTVTWSLGTNDLHLATFALQ SYDTLGMKLAVGDQMILRYNGSELAEPWEQSGFIVRIPSATRETFTLELIDSKNKSVPTH LHTGFTAELVWKGTSYARMQDALKKLAVNKKSVSEHIYYALMGIDAPSIEFRVKKKKSYS IPNFAKLNASQENAIHNVLSKPLSLIQGPPGTGKTVTSATIVYQLTKLHKGQILVCAPSN IAVDHLASKLEQLGLRVLRLIAKSREDVESSVQHLSLTEQMRKHASKDLKRLLALKEKNG ELSASQYKQMASLLYKEEALLMDKCQVICCTCVGAGDRRLAKRKFRTVLIDESTQASEPE CLIPIVKGANQVILVGDHQQLGPVILSRKAGDAGLRQSLFERLIYLGHMPIRLEVQYRMH PCLSEFSSNVFYDGSLQNGVTAESRSRPDSTFPWPIREIPMMFWAVFGREELSASGTSYL NRTEAMNCEKIITRLLKEGVDPGKIGVITPYAGQATFIVQYMEMNGLIADKSRYSEVEVA SVDSFQGREKDYIILSCVRANDNQLIGFLSDPRRLNVALTRARFGMAILGNPKTLSKNPM WNRLLMHFREKGCLVDGSLENLKLCNIPLSRGGQATNGEFGLAPSTATGRSQSYDTNSLF SYGTGSNLSQQNMHFQDAANSLWPKLGGRHEQQSVASSSVASSRRSSFISVENDEIRNLA RQFRSQTRF NT seq 2730 nt NT seq  +upstreamnt  +downstreamnt atgagcgagacttttggcgattcaaactccatgaccaagtcgcccgatgcctgcgcttac tgcggcatatctgagcctgacagtttggtgaagtgcaacacgtgcgaaaaatggttttgc aacgggaaaacctcgggggccggttcccatataatcacccatactgttctttccaagcac cagtctctcagtctccatccggactcggagcttggagataccatgctggagtgctacaac tgtggcaaccgcaacatatttgtgcttggatttgtttctgcgaaaacagactctgtggtc gtcattctgtgtcgtcttccctgtgcacagtcaaaaaacgtggaatggaacacagcaaat tggcagtcattaatcgaagaccgcgccctgcttccgtgggtagcgaagccgccgtctgag gaggagaagctggaagcacagccaatcacctctttacaaataacaaagctcgagaccaag tggaagcaggataaggacgccactcttggagacatggaggaagccgagatggaggaagag ctggagcccattttgatgcggtacagcgacgcattccagtatcagcgctcgtttgcgccg ctggtgcagtacgaagcaaactacgacaagcaactcaagcagtcccagagtcttgagagg ctcactgtgacctggagtctgggcaccaacgacttgcatctagctacttttgcgctgcag tcgtacgacacgctggggatgaagctggcagttggagaccagatgattttgcgctacaac gggtccgagcttgctgagccgtgggagcagtctggatttattgtgcggatccccagtgct actcgcgaaactttcacattggagctgatcgactcgaaaaataaaagtgtgccgacgcat ctccacacgggcttcactgccgagcttgtttggaagggaacctcgtatgcaaggatgcag gacgcgctgaaaaagctcgctgtgaacaaaaagagcgtttcagaacacatatattatgct ctgatggggatcgatgctccgtcgatcgagttcagagtgaaaaagaaaaaatcgtactca atacccaactttgccaagctcaacgcgtcgcaagaaaatgccatccacaacgtcttatct aaaccgctgtctttgattcaaggtccaccgggaacgggaaaaaccgtcacctcggctacc atcgtgtaccagctgacaaagctgcacaagggccagattctggtgtgtgcgccttccaac atcgcagtcgaccatctcgcatccaagcttgagcagctaggactccgtgttctgcgtctg atcgctaagagccgcgaggacgtcgagtcttcggtgcaacacctctcgctcacggagcag atgcggaaacacgcgtcgaaggacctcaaaagactcctggccctcaaggagaagaacggc gaactctctgcatcgcagtacaagcagatggcgtcgctgctatacaaggaagaggcgctg ctcatggacaagtgtcaggtgatctgctgcacgtgtgtgggagctggcgaccggcgtctg gccaagcgtaagttcaggacggtgctgatcgacgagagcacgcaggcttcggagcccgag tgtctgatcccgatcgtgaagggagccaaccaggtcattcttgtgggagaccaccagcaa ctcggcccagtgatactaagtagaaaggccggcgatgcaggactcagacagtcgctcttc gaaagactcatctatctgggacacatgccgatcaggctggaggttcagtacagaatgcac ccatgtttgtctgagttttcttccaacgttttctacgacggcagtttgcagaacggtgtc actgcagagagcagatctcgtcccgacagtacgttcccttggccgatcagagagattcct atgatgttctgggctgtatttggtcgcgaggagctcagtgcgtcgggcacgtcatatctg aacaggacagaagccatgaactgtgagaaaataattactagactgctaaaggaaggagtg gaccccggcaagatcggagtgatcacaccatatgccggccaggcgacgtttattgttcag tacatggagatgaacggcttgatagcagacaagtcgaggtactcggaggtggaggtcgcg tcggtcgactctttccaaggacgtgaaaaggactacattattctctcgtgtgtgcgtgcg aatgataaccagctaattgggttcctgagtgatccgagacggctcaacgttgctctgacg agggcgcggtttggaatggcaattctcggcaaccctaagacgctgagcaaaaatccgatg tggaacaggttgctcatgcatttcagagaaaaggggtgtctggtagacgggtcgcttgag aatcttaagctgtgcaacatcccactcagcagaggcggtcaggccacaaacggcgagttt gggcttgcgccgtccacagcaaccggcagatcgcaatcatacgacacaaacagtctattt tcatacggcacagggtccaatctgagccagcaaaacatgcatttccaggacgcagcaaac agtctttggccgaagctgggcggtcgccacgaacagcaatctgtggcgtcgagcagcgtt gcctcgagccggcgatctagttttatcagcgtggaaaatgacgaaattcgaaatctagca aggcaattccgaagccaaaccagattttga

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